Brassica oleracea (wild cabbage): 106325870
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Entry
106325870 CDS
T04124
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106325870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boe03032
]
106325870
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106325870
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
106325870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
106325870
NCBI-ProteinID:
XP_013619376
LinkDB
All DBs
Position
C2:complement(43630115..43637375)
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AA seq
1412 aa
AA seq
DB search
MSGDNSTEVERKRRRAAEASSWKNSVERLKAIRQGGLGNLSASGGGYDDIKLEQPFDDGD
EYDAIVSLRRRGFVGEEEDWSKPSGPESTDESEDDGGFSGRVKKKGKEEAAQVKKVNPWL
KAAATISSLKKGKESFLEEVLAKVNPDDMDRERHRRRKQPSRIHDSVDKCDHVAMENELM
KEQEEEEDVTVTLPQTSENMELPSVIVEGSNNIKQSEEAKAESGVKKEVNATVDTKEKEA
MCKGGTENGAEFDLDADGSLRFYILDAYEEAFGASMGTVYLFGKAKMGDTYKSCCVVVKN
IQRCVYAIPNGSIFPSHELFMLEQEAKHSKLSPQSFRVKLHEIASKLKNEISQQLLRLNV
SNYSMALVKRSYAFEKPDVPAGEQYVLKINYPFKDPALPQNLKGESFCALLGSHTSALEL
FILKRKIMGPSWLKISNFSISLPSQRVSWCKFEVTVESPKVITVLVPEEKVVHPPAVVTA
INLKTIVNETQNISEIVSASLLCFHNAKIDVPMAGPERKRCGILSHFTVVRNPEGTGYPI
GWKKEVSDRNSKKGCCVLSFENSERALLNRLFVELNKLDSDVLVGHNISRFDLDVLLQRA
QGCKVLSSMWSKIGRLKRSFMPKLKGNNKSGLMSCIAGRLLCDTDLCSQDLLKQVSYSLT
DLSKTQLNQDRKQISPNDIPKMFQSSKTLVELIECGERDAWLSMELMFHLSVLPLTLQLT
NISGNLWGKTLQGSRAQRIEYYLLHTFQSRKYILPDKISQRMKEIIKSSKRRISHGELDA
ELALENDPSKKGPGYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVPRSED
GVPRLPSSQTPGILPKLMEHLVSIRKRVKQKMKKETGLKYWELDIRQQALKLTANSIYGC
LGFSDSRFYAKPLAELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEV
KTIITKVIQEVNKKYRCLKIDCDGIYKRMLILRKKKYAGVKLQFKDDGQTCEEIERKGVD
MVRRDWSILSKEIGDLCLAKIFYGGSCEDVVEAIDNELVKIKEEMRNGQVALEKYVITKA
LTKSPEAYPDSKSQPHVQVALRMRQRGFKEGFNAKDTVPYIICYEQGNASSVSSAGIANR
ARHPDEVKSDESRLLVDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSNN
DATSSDPSTSLLFATSDEERYKSCEPLTLTCPSCSASFNCPSITSSVCASISNKSETEES
TFWLRLRCSKCTGRISPAMIANQVKRQIDGFVSMYYKGTMMCDDESCKHTTRSPNFRLLG
DRERGTVCPNYPNCNGTLLRKYTEAYLYKQLSYFCHILDTQCSLKKMDVGVRIQVEKAMT
NIRPAVESAASIARSIRDRCDYGWVQLKDIAI
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgacaattcgacggaggttgaacgaaaacgtcgcagagccgcggaggcgtcg
agttggaagaattccgtagagcgactgaaagcgattcggcaaggaggacttgggaaccta
tcggcttcaggtggtggctacgatgatattaaactggaacagccatttgatgatggtgat
gagtacgacgcaattgtatccctgcggcggcgtgggtttgtaggtgaggaggaggactgg
tcgaagcccagtgggcctgagtcgactgatgaatcggaagatgatggtggatttagcggg
agagtgaagaagaaaggaaaagaagaagcagcgcaggttaagaaggtgaatccttggctt
aaggctgcagctactatatcgagtttgaagaagggcaaagagagttttcttgaggaggtt
ttagcaaaggttaatccagacgatatggatagagaaagacataggagaaggaaacaacca
tctaggatacatgattcagtcgataaatgtgatcacgttgccatggagaatgagttgatg
aaagaacaagaagaagaagaagatgtgacagtcacccttccgcagacttctgagaatatg
gaattacctagcgttatagtggagggatcaaacaatataaaacagagtgaagaagctaag
gcagagtcaggagtgaagaaggaggtgaatgcaacagttgatacgaaagagaaggaagcc
atgtgcaaaggtggaactgagaatggggcggaatttgatttggatgctgatgggtcactt
cgtttttacattcttgacgcttatgaggaggcttttggtgcgagtatgggcacagtatat
ctgtttgggaaggctaaaatgggagatacgtacaagagttgctgtgtggttgtcaagaat
atccagagatgtgtttatgctattccaaatggttccatattcccttcccatgaacttttt
atgctcgagcaagaggcgaaacactcgaaactttctcctcaatccttccgggtgaagtta
catgaaatagcatcaaaactgaagaacgaaatttctcagcaattgttacgactcaacgtt
tcaaattacagcatggcacttgtcaagagaagctatgcatttgagaagcctgatgtgcca
gctggcgagcaatatgttttgaagattaattatccatttaaggatcctgcacttccacaa
aaccttaaaggggagtctttttgcgctttgctaggctctcacaccagtgctttggagctt
tttatccttaaaaggaagatcatgggaccttcttggctgaaaatttcaaacttctctatc
agtttaccttctcaacgagtgagctggtgcaagtttgaggttactgttgaatctcccaag
gttatcactgttttagttccggaggaaaaagtggttcatcctcctgctgtcgtcacagct
ataaatttaaagactatagtcaatgaaacgcagaacatcagcgaaattgtttcggcgtct
cttctctgttttcacaacgccaagattgatgttccaatggcaggtccagaaagaaagaga
tgtggtattctgagtcatttcactgtggttaggaatcctgaaggaaccggctacccgatt
ggttggaagaaagaagtgtctgacagaaattcaaagaagggctgctgtgttttaagtttt
gaaaacagtgaaagagctttgctgaaccgattgtttgtggagttgaacaaattggacagt
gatgttcttgtgggacataatatatcaaggtttgatctggatgtccttctccaaagagcc
cagggttgcaaagttttgagtagcatgtggtccaaaattgggcgtctcaaacgctcgttc
atgcctaagcttaaagggaacaacaagtcagggctcatgtcttgcattgctggaagacta
ttatgtgatacagatctatgttctcaagacttgttgaagcaggtcagttattcgttaaca
gacctttcaaagacacagctgaaccaggacaggaaacagatatcacctaatgatattccc
aaaatgtttcagtcatctaagacacttgtggaacttattgaatgtggggagagagatgca
tggttatccatggagctcatgtttcatctaagtgttcttcctctcactctccagcttact
aacataagtggcaatctctgggggaaaacccttcaaggatccagggcgcagagaattgaa
tactacttactacatacattccagtcgagaaagtacatcctcccagacaaaatttcgcaa
cgtatgaaggaaattataaagtcatcaaaaagaagaatcagccatggtgaattggatgct
gagttggctttggagaatgatccgtctaagaagggtccaggctacgctggtggactggtg
ttggaaccaaagaaagggttatatgacaaatatgtgttgcttcttgacttcaatagtctt
tacccgtctattatacaggaatataatatatgtttcacgactgtgccacgatcagaagac
ggagttcctcgtttaccttcgagccagacacctggaattcttccaaagttgatggaacat
ttggtcagtataaggaaacgtgtgaaacaaaagatgaagaaggaaacaggtctcaagtac
tgggagcttgacattcggcagcaggcattaaaactcacagccaatagtatatacggatgt
ctggggttctctgattcaagattctacgctaagcctttagcagagctcataacactacag
ggaagggagatcctgcaaagaaccgtggatcttgtacagaatcatttaaacctagaggtg
atttatggtgacacagattcaatcatgattcacagtggactagatgatatcgaagaggtc
aaaaccattataacaaaagtcatccaagaggtcaataagaagtacagatgtctgaaaatt
gactgtgatggcatatataagagaatgcttattctaagaaaaaagaagtatgctggcgtc
aagttgcagttcaaggacgacgggcagacttgcgaggaaattgaaagaaaaggtgtggat
atggttcgtcgtgactggagcatactctccaaggaaattggagacttatgcttggctaag
atcttttatggagggtcgtgtgaggatgttgttgaagcaattgataacgaacttgtgaag
ataaaagaggaaatgagaaatgggcaagttgcacttgagaagtatgtcatcaccaaggca
ttgactaagtcaccggaagcttatccagattccaaaagccaaccacacgttcaagtcgca
ctcagaatgaggcaacgtggttttaaagaaggtttcaatgccaaggatactgtaccttat
ataatctgctatgaacagggtaatgctagctctgtcagctcagcagggattgccaatcgt
gctaggcatcctgatgaggtgaagtcagacgagagcagattgttggttgacatagattac
tacttggcacagcagattcatcccgtggtgtctcgtctgtgcgcagagattcagggcaca
agtcctgagaggttagccgagtgtttaggacttgacccatcaaagtatcgaagcaacaac
gatgctacgagcagtgatccttctacatccctcttgtttgctacaagcgatgaagaaaga
tataaaagctgtgagccgttaacactaacatgccccagctgctctgcttctttcaactgt
ccatctattactagttcagtttgcgcgtcgatcagtaataaatctgaaacagaggaatct
acattctggcttagactgcgttgctcgaaatgcacgggaagaatatcccctgcaatgata
gctaatcaggtgaaaaggcagattgatgggttcgtgtcaatgtactacaaaggcacaatg
atgtgtgacgatgagtcttgtaagcacaccactcgcagccccaactttcgtctgctaggt
gaccgggaacggggaacagtttgcccaaactatcctaactgtaatggaaccctcttaaga
aagtacactgaagcatacctgtacaagcagctgtcatacttttgccacatcctagacaca
caatgctctctaaaaaagatggatgttggtgtgagaattcaagtagagaaagcaatgacg
aatataagacctgcggttgagtcagcagcatcgatagctcggagtatccgagaccggtgt
gattacggatgggtgcaactcaaagacatagccatttga
DBGET
integrated database retrieval system
