Brassica oleracea (wild cabbage): 106327344
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Entry
106327344 CDS
T04124
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106327344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106327344
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106327344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
MRNIP
Motif
Other DBs
NCBI-GeneID:
106327344
NCBI-ProteinID:
XP_013620962
LinkDB
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Position
C1:41749978..41755498
Genome browser
AA seq
992 aa
AA seq
DB search
MGTENQGYPNFPARPPPSSSSPFASAPPPGGAQTVGFRPPSSQPTRPFTPSGPPMAPPVG
AMRPGQSPFVSQIPGSRPPPPAYGGPPGGGGGGSFQRFPAPPPPFPGTQSPPPSGPPATQ
TLAGHLSPPMSLRPQQPMGPGGYASPPGPGFQQSVPPVNPSYSGVGPYFPGYPSNQAPPV
SFQSSSQGPRPTYPPQTGGFGQHPGQQNLHPSYAPPTSNVQGLAEDFNSLSLSNIPGSLE
PGLDPSSFPRPLDGDVEPNSFAEMYPMNCHSRYLRLTTSAIPSSQSLASRWHLPLGAVVC
PLAEAPEGEEVPLVDFGSSGIIRCRRCRTYVNPYVAFTDSGRKWRCNICSMLNDVPGEYF
SHLDATGRRMDVDQRPELTQGSVDFIAPTEYMVRPPMPPTYFFLIDVSFSATKSGMLEVA
AQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNLKSSLSQPQMMVVSDLDDIFIPLPDDLL
VNLSESRNVVEAFLDGLPLMFQDNVNVESAFGPAVKAAYMVMNQLGGKLLIFQNSLPSLG
AGRLKLRGDDPRVYGTDKEYALRVAEDAFYKQMAADCTKFQIAINVYAFSDKYTDIASLG
TLAKYTGGQVYYYPGFQSSIHGDKLRHELARDLTRETAWESVMRIRCGKGIRCSSYHGNF
MLRSADLLALPAVDCDKAYAVQLALEETLLTTPTVYFQVALLYTASCGERRIRVHTAIAP
VVTDLGEMYRQADTGSIVSVYARLAIEKTLSAKLDDARNAIQQKIVKALREYRNLHSVQH
RLGSRLIYPESLKFLPLYGLAICKSTPLHGGPADASLDERSAAGFTMMALPVKKLLKLLY
PSLFRVDEWLLKPSADHDDLKDVLRRLPLAAESLDSRGLYIYDDGFRLVLWFGRMLSPDI
AKCLLGTDFAAELSRVTLQEQENGMSKKLMRLIKKVRDNDPSYHPMCLLVRQGEQPREGF
LLLRNLIDDQMGGSTGYVDWMLQLHRQVQQNA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgagaatcaaggttatccgaattttccagctaggcctcctccttcgtcctcc
tctccgtttgcatctgctccgccgccaggtggagcacagactgttggctttagaccacct
tcttcccaacctacaaggcctttcacgccttctggtcctcctatggctccacctgtgggt
gcaatgaggcctgggcaatctccttttgtttctcagattccagggagtagacctccgcct
ccagcttacggaggtcctcctggtggcggcggcggcggctcttttcagcgttttccagct
cctcctcctccgttcccgggtactcaaagccctcctcctagtggtcctccagctactcaa
actcttgcaggtcacttgtcgcctcccatgtctcttcgcccacagcaaccaatgggacct
ggaggatatgcttctcctcctggtcctggttttcaacagtcggtgcctccagttaatccg
tcttactctggtgttggaccatattttcctggttatcccagtaatcaggctcctccagtg
tcattccagtcttcatctcagggacctcggcctacatatcctcctcagacaggaggtttt
ggtcagcacccaggacagcagaacctgcatccgagctatgcacctcctaccagcaacgtc
caaggcttggctgaagatttcaattcgctatccctgtcaaatattccgggatcgcttgag
ccaggacttgatccttcctcattcccaagaccactggatggtgacgtggagccaaattca
tttgctgaaatgtaccctatgaattgtcattcgagatatctacggctgacaactagtgct
ataccaagttcccagtctctggcgtcgaggtggcatttacctctaggagctgtggtttgt
ccacttgctgaggctcctgaaggggaggaagtaccacttgttgattttggctcaagtggc
atcatccgttgcagaagatgccgtacctatgtgaatccttatgtggcttttacagattct
ggaaggaagtggcggtgcaacatttgttctatgcttaatgatgtgcctggtgaatacttt
tcacatttggatgctactggccgaagaatggacgtggatcaacggcctgagctgacccaa
ggcagtgttgatttcatagctccaacagagtacatggttcggcctccgatgccgccaacc
tacttcttcctcattgatgtttcgttttcggctactaaaagtgggatgcttgaggttgct
gctcaaacgattaagtcttgcctggataacttgcctggttatcccagaactcaaattgga
tttattacttatgacagcactttgcatttttacaacctgaagtcatctctgagccaacca
caaatgatggtggtttctgatctggatgatatatttatcccattgccggatgatctcctt
gtcaatctatctgaatctagaaatgtggtggaagcctttttagacggtctgcctcttatg
tttcaagataatgtcaatgtggaatcggcttttggtccagccgtcaaagcagcgtacatg
gttatgaaccaactcggtggcaagttgctaattttccagaactcgttaccttctcttggt
gctgggcggttaaagttgcgcggagatgatcctcgtgtctatggaactgacaaagaatat
gctttaagggtagctgaagacgccttctataagcaaatggctgccgattgtaccaagttc
cagattgcaattaatgtttatgcattcagtgataagtacactgacattgcctccttaggg
actctggcaaaatacactggtggacaggtgtactactatccaggcttccaatcatctatc
catggagataagttaagacacgagctggctagagaccttacaagggaaactgcctgggaa
tccgtcatgcgaataagatgtggaaaaggaattcgttgctcgtcctaccatgggaacttc
atgctaaggtctgccgacctgcttgctcttcctgctgttgattgtgacaaagcatatgca
gtgcagctagctctggaagagacattgctaacaaccccgactgtgtatttccaagtcgct
ttactatatactgcttcttgcggagagaggcgtataagggtacacacagctattgcacca
gtggttacagatcttggagagatgtatagacaagcagacactggctccattgtctctgta
tatgctagattagcaattgagaaaactttgtccgcaaaattggatgatgcacggaatgct
atacagcaaaagattgttaaagccctcagagaatatcgtaatcttcactcggtgcagcat
cggttggggtctagattaatatacccagagtctctgaagttcttgccattgtacggattg
gcaatttgtaagtccacacctcttcatggtggaccagctgatgcttcacttgacgaacga
agtgcggcaggcttcaccatgatggccctgcctgtcaaaaagctattgaagctgttatat
cccagtttattccgtgttgacgagtggctcttaaagccatcggcagaccatgatgacctc
aaggacgtattgaggagattgcctctggctgcagagagtttggattctagaggcctttac
atttacgatgatgggtttcgattggtgttgtggtttggccggatgctttcacctgacatt
gctaaatgtcttcttgggactgactttgcagcagagctctcaagggttacactgcaagaa
caagagaatgggatgtcgaagaagctaatgaggctgataaagaaagtgagggataatgat
ccgtcataccatcccatgtgtttgctagtgaggcaaggagaacaaccccgagaaggcttc
cttctcctcagaaatctcattgatgaccagatgggcggttcgactggttatgttgattgg
atgctgcaacttcaccgccaagtccaacaaaatgcgtaa
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