Brassica oleracea (wild cabbage): 106327974
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Entry
106327974 CDS
T04124
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106327974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boe03032
]
106327974
03400 DNA repair and recombination proteins [BR:
boe03400
]
106327974
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106327974
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106327974
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
106327974
Bloom's syndrome complex (BTR)
106327974
FA (Fanconi anemia) pathway
106327974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
106327974
NCBI-ProteinID:
XP_013621761
LinkDB
All DBs
Position
C3:55699632..55703563
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AA seq
707 aa
AA seq
DB search
MKKSPLPVQNVNRSDKNFAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT
GGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVRNKIHE
DLDSGKPSVRLLYVTPELIATKGFMLKLRKLHHRGLLNLIAIDEAHCISSWGHDFRPSYR
QLSTLRDSLADVPVLALTATAAPKVQKDVIESLSLRNPLVLKSSFNRPNIFYEVRYKNLI
DNAYTDLCNLLKSCGNICAIIYCLERTTCDDLSLHLSSTGISSAAYHAGLNSNLRSTVLD
DWLSSKKQVIVATVAFGMGIDKKDVRMVCHFNVPKSMESFYQESGRAGRDQLPSRSVLYY
GVDDRKKMEFLLRNSENKKSPSSSSKKPTSDFEQILRYCEGSGCRRKKILESFGEKFPVQ
QCNKTCDACKHPNQVARSLEELTTTASRRHNSSRVFITSSSDNKTNEGQYSEFWNRNEDG
SNSDEEISDSDDGADVVKSLAGPKLSRKLGVDEKLVLLERAEEKYNESNKQVKKSEKNAI
SETLRESSKQRLLNELTKVLQLLGVKEIESQNASEFLENECYRKYSKAGKSFYYSQIAST
VRWLGTATRDELMTRLSSMAREEEEEPSGEPILVTEPVENIEEEDRNTYTAELQVDEPTQ
LLVTSPSRSPIRLPEIPSFSEFVNRRKMKHSTEGSDGKKPSKVMKLQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcgccgttgccggtgcaaaatgttaaccgctccgataagaacttcgccgga
aaagaagcactggtgaagctattgcgatggcacttcggccatgcagatttcagagggaag
cagctagaggcgattcaagcggttgtgtcaggaagggattgcttttgcttgatgccgacg
ggaggagggaaatcgatttgttaccagatacctgcgttggctaaacctggaatcgtgctt
gttgtttctcccttgattgctttgatggagaatcaagtgatggcgttgaaggagaaaggt
attgctgctgagtatctctcgtccactcaagctacacatgttaggaacaagatccacgag
gaccttgattctggaaaaccttctgtgagattgctgtatgtaactccagaattgatcgcg
acaaaaggatttatgctgaagctgagaaagctccatcacaggggtttactgaatcttata
gccatagacgaggcacattgcatctcttcatggggccacgacttcagacctagctatcgt
caactttcaacattaagagattctttggctgatgttccagtcttggctttaaccgctaca
gctgctcctaaggtacaaaaagatgttattgagtccttgagtctgcggaatcctttggtc
ctcaagtcttctttcaatcgcccaaatatcttctatgaagttcggtacaaaaatcttata
gataatgcttatactgatttgtgcaacttgctcaagtcatgtggaaatatatgtgcaatc
atctattgccttgagcgtacaacctgtgatgacttgtctcttcatctttccagtactggg
atctcttctgctgcctatcatgcaggactgaatagtaatctgagaagtaccgtattagat
gactggctgtcctcgaagaagcaagttattgtcgccaccgtggctttcggaatgggtata
gataagaaggatgtcaggatggtttgccacttcaacgttccaaaatcgatggaatctttc
taccaagagtccggcagagcaggtcgggatcaactaccttcaagaagtgtattatactat
ggcgtagacgatagaaagaaaatggagtttctactacgaaactcggagaataagaaatcc
ccatcctcatcctcaaagaagcctacatccgacttcgagcagattttgagatactgcgaa
ggttctggatgccgaaggaaaaagattcttgagagctttggtgaaaagtttcccgtacag
caatgcaacaaaacgtgtgatgcatgtaagcatccaaatcaagttgctcgtagcttggag
gagctcacgactaccgcctcccgaagacacaactcttctcgagttttcatcaccagctcg
agtgataataagaccaatgaagggcagtactctgagttctggaatcgtaatgaagatgga
agcaattccgacgaggaaatatcagattcagatgatggagctgatgttgtcaaaagccta
gcaggacctaaactatcgaggaagctgggagtagatgagaaactggttttactggagcgg
gctgaggaaaagtacaacgagagcaataaacaggtcaaaaagtcagagaagaatgcaata
tctgaaacactaagggaatcaagcaagcagagactcttgaatgagcttacaaaagtactt
caactgctcggtgttaaagagattgagtcccaaaacgcatctgagtttcttgaaaacgag
tgctatagaaaatacagcaaagcagggaaatcgttttactactcacagatagcgagtact
gtgagatggttaggaaccgcaaccagagacgagctaatgacccgacttagctcaatggcc
agagaagaagaagaagagccatcaggagaaccaatcctggtgactgaaccagtcgagaac
atagaggaagaagacagaaacacatatacagccgagctacaggtcgatgaaccaacacag
ctgcttgtgactagccctagccgttcgcctataaggctcccagagattccgtcattctca
gagtttgtgaaccgtagaaagatgaagcattctaccgaaggttctgatggcaagaaaccg
tcaaaggtaatgaagctacagtaa
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