Brassica oleracea (wild cabbage): 106330600
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Entry
106330600 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106330600
Organism
boe
Brassica oleracea (wild cabbage)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_1
Retrotrans_gag
rve
Asp_protease_2
gag-asp_proteas
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
106330600
NCBI-ProteinID:
XP_013624494
LinkDB
All DBs
Position
C3:40241798..40247377
Genome browser
AA seq
1737 aa
AA seq
DB search
MEQEQHHPQEQVAAQGIHAQAGNGQGAANPRPVHQPRNPRAIGAHDEPTIHNNLTGIRAP
PGANNNFEIKSNLINMIQSNKYHELPMEDPLDHLHTFDMLCGTVRINGISEDAFKLKLFP
FSLGDRAHLWEKTLLSSSVETWDECKKVFLTKFFSTSRTARLRNEITGFTQKGLEIFGEA
WERFKGYTLKCPHHEFRSRLDTASNGHFLGREEQDGMQLIENLALTDSTYCDDYDRSNMG
TVTQDEQARKDLKVLRGEMDQLLQLQKKQVHYIGEYDQQLVQIEPQEEFVQSVQEEVNYV
GGQGNYNQNFNYRNQNTQIPQGLNTLQDNFQNKPQYIPQGNYQQKPFYNNQQGNFQQKAY
NNPPLGFYPNKGNQQNQGQRSSSNAPPTESSTDFLLKQLLASHAKSDKRIEDMDSKITGS
YGALNSRMDALENQFTTMNTNSKRLMGSLPGKPEQNPKEFIGAITLRSGKELPSRDLIRD
NEKQEGEVIINVEDNVVILDEKKDEEILQKIVDSKGKGKAVEEKKDTTEKGDTSTANDTP
FVPPPYEPKLSFPGRFKKQLVDNKFLKDAVKEKQKKLEGMVVLTQECSAIITKTDVPKKL
DDPRCFTLPCSLGPLKFENCLCDLGASISLMPLSVAKRLGFTQFKKCRLSLVLADRSVRL
PIGILKDLPVMVGNCEVPTDFVVLEMDEEPKVPLLFGRPFLATAGAVIDVKNGKIDLHLG
KKNVLKFDIRDMMKKSTIEAQVFYIETMDALADEFLEELAIKDSLQHALTIEKEDQLIES
KKSDEYSRRMDSCKMAEDADQFMDLPEINHHAHSVEQRDEALNDDWSELKAPKVDLKPLP
NGLRYAFLGPNETYPVIVNDDLTDDELSLLLNELRKYRKAIGYSLDDIRGISPSLCMHRI
HLEDESMTSIEHQRRLNPNLKDVVKKEILKLLDARIIYPISDSTWISPVHVVPKKGGITV
VRNEKDELIPTRTITGHRMRIDYRKLNSASRKDHFPLPFIDQMHERLTNHPYYCFLDGYS
GFFKIPIHPNDQEKTTFTCPYGTFAYRSMPFGLCNAPATFQRAMMSIFSDLIEEVVEVCM
DDFSVYGSSFASCLSNLCRKGIEVDQAKIDVMMGLQPPTSVKGIRSFLGHAGFYRRFTKD
FSKVARPLTRLLCKETEFCFSQECLEAFNKMKNDLVCAPIVQPPDWDFLFEIMCDASDYA
VGAVLGQRKGNKSHVIYYASRTLDEAHVNYTTTEKELLAVVFAFEKFRSYLVGSKVVVYT
DHATLRHLLAKKEAKPRLLRWILLLQEFDLEIKDRPGVENSVADHLFRLRIEGGVPIDEG
LPEEQIMAIKAVDFAYKIRERLEEAKALEERLPWYADLVNYLASGKEPLGLEGYQRKKFF
KGVKRYFWDEPYLYTLCKDQLYRRVVAEEEICDSCQRRGNISKRNEMPQNPFLEVEVFDV
WGIDFMGPFPMSFGNKYILVAVDYVSKWVEAIASPTNDSRVVIKMFKTIIFPRFGVPRVV
ISDGGSHFINKIFESLMKKNGVKHKVATPYHPQTSGQVEVSNREIKAILEKTVGTTRKDW
SVKLDDALWAYITAFKTPLGTTPFNFVYGKSCHLPVELEYKALWTVKLLNFNIKTAKEKR
LIQLHELHEIRLDAFESFRIYKEKTKAFHDKKILRREFKAGDQVLLFNSRLKIFAGKLKS
RWSRPFVIKEVRPYGAVVLTGKRGEDFTVNGQCLKLYMADQEIGEEASVPLSEPIPA
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaacaacatcatccccaagaacaagtcgctgctcagggcattcatgcccaa
gcaggcaatggtcagggagctgccaaccctagacccgtccaccaaccccgaaatccgcga
gccataggtgctcatgacgagccaaccatacataacaaccttacgggcattcgcgcacca
ccgggggcgaacaacaactttgagatcaagtcaaacttgatcaacatgatacaatctaac
aagtatcatgaactgccaatggaggatcctctagatcatctccacacatttgacatgctt
tgtgggactgtcaggatcaatggcatttctgaagatgctttcaaactcaaactcttcccg
ttttcacttggagacagagcacacttatgggagaagaccctactttcaagctcggtcgaa
acatgggacgaatgcaagaaagtatttttaaccaagttcttttctacttctagaactgca
cgactccgaaatgaaatcactggattcacacagaagggacttgaaatcttcggagaagca
tgggagcgcttcaaaggctacacactgaaatgccctcaccatgagtttcgatcaaggctt
gatacagcgagtaatggtcatttcttaggacgtgaggaacaagatggaatgcagttaatt
gagaacttagccctgactgactccacctactgcgatgactatgatcgctcaaacatgggt
actgtgactcaagatgagcaagctagaaaggatttaaaagtgctaagaggagagatggac
caacttcttcagcttcagaagaaacaagttcactacattggtgaatatgatcaacagctg
gtccaaattgagcctcaagaggaatttgtgcagagtgtccaggaagaagttaactatgta
ggaggacaaggaaactacaatcaaaacttcaactacagaaatcagaacactcagatccct
caaggactgaacacactgcaagacaactttcaaaacaagcctcagtatatccctcaaggc
aactaccagcagaaacctttctataacaatcagcaaggcaacttccagcaaaaagcctac
aacaacccaccacttggtttttaccctaataagggtaaccaacaaaaccaaggtcaaaga
agctcctccaatgcaccaccaacagaaagcagtacggatttcctcctcaaacagcttctg
gcctcacatgccaaatctgataaaagaattgaagatatggattctaagatcactggatcc
tacggagctctcaattctagaatggatgctcttgaaaatcagtttaccactatgaacaca
aattctaaaaggctaatgggttcactccctggaaagcccgagcaaaacccgaaagaattc
attggggcaatcacactgaggagtgggaaagaactaccttcaagagatctcattcgggac
aatgagaaacaggaaggggaggtgatcatcaatgtggaagacaatgtggtgattttggat
gagaaaaaggatgaggagatccttcagaagattgtggactcaaaaggaaaagggaaagca
gttgaagagaaaaaggacacaactgagaaaggagacacttccactgcaaatgacactcca
tttgtgccccctccatatgaacccaagctctcattccctggaagattcaagaagcagctg
gttgacaacaaatttttgaaagatgcagtcaaggaaaaacagaagaagttagaaggaatg
gtagtgctcacacaggagtgtagtgcaatcatcacaaagactgatgttccgaagaagtta
gatgatccaagatgcttcactctcccatgctctcttggacccttgaagtttgaaaattgt
ctatgcgatcttggagcaagcatcagtctgatgccactttcggtagctaagcggcttgga
ttcactcagtttaagaagtgtcgcctctctttggtactggctgacagatcagtaaggttg
cccattggaatacttaaggaccttcctgtcatggttggaaactgtgaagtacccactgac
ttcgtcgttcttgagatggacgaggaacccaaagtccccttgctctttggtagaccattc
cttgctactgcaggagctgtcattgatgtaaagaatggcaagatagatcttcatcttggg
aaaaagaatgttttgaaatttgatatcagagatatgatgaagaagtctacaatagaagcg
caagtcttttacatagaaaccatggatgcactcgctgacgagtttctggaagagctggct
attaaagactcccttcagcatgctcttaccattgaaaaagaagatcaactgatcgagagc
aagaaaagcgatgagtactcaaggaggatggactcttgcaagatggcagaggatgcagat
cagttcatggacttaccagagatcaatcaccatgcccactcagtggaacaacgggatgaa
gctctcaacgatgattggagtgagctcaaagccccaaaggtggacctgaaaccgcttccc
aatgggctcaggtacgcttttcttggaccaaatgaaacttatccagtgattgtgaatgat
gatctcactgatgatgaattgtctttactcttgaatgaactgagaaaatatagaaaggca
attggttactctctagatgatattagaggaatttcaccttcactttgcatgcacaggata
cacttagaagatgaatcaatgacttctatagaacatcaaagaaggttgaatcccaacctg
aaagatgttgttaagaaagagattctaaaacttttggatgcaaggataatctatcctatt
tctgatagtacctggatttcccccgtccatgttgtgccaaagaagggtggaatcactgtg
gttaggaatgaaaaagatgaattaattccaactagaacaatcacaggtcatcgaatgcgc
attgactataggaaattaaactctgcatctagaaaagatcattttcctttgccattcatt
gatcaaatgcatgagcgtcttactaaccacccctattattgctttcttgatggatactcg
ggattcttcaaaatccccatacatcccaatgatcaggagaaaacgactttcacctgtccg
tatggtaccttcgcatatcgaagtatgccatttggattgtgtaatgcaccagcaaccttt
caaagggctatgatgtcgattttctctgatcttattgaggaagttgtggaggtatgcatg
gatgacttctctgtatatggttcttcttttgcctcgtgtttgtctaatctgtgcaggaaa
ggcatagaggttgatcaggctaagattgatgtcatgatgggtttacaaccgccaacatct
gtgaaggggatcagaagtttccttggacatgcaggcttctacaggcgcttcacaaaagac
ttctcgaaagtagcgcggccattgacccgactcttgtgcaaagaaactgagttctgtttc
agccaggaatgccttgaagcattcaacaagatgaagaatgatctggtgtgcgcccctatt
gttcaaccgcctgattgggactttcttttcgagatcatgtgcgatgccagcgactatgct
gttggggcggtgttggggcaaaggaaaggcaataaatctcatgtgatctactatgctagt
cgcactcttgatgaagcacatgtgaactataccaccacagagaaagagcttctagcagtg
gtctttgcatttgaaaaattcagaagctatctggttggatcaaaggtagttgtctataca
gatcatgctactttaagacatctactggcaaagaaagaggcaaagccaagacttctgaga
tggatcttactactccaggagtttgatcttgaaattaaggataggccaggagtggaaaac
agtgtagctgatcatctgttcaggttgagaattgaaggaggggttcctattgatgaggga
ctccctgaagagcaaataatggctatcaaagcagttgattttgcttacaagattagagaa
aggttagaagaggccaaggcattggaagaaagattaccttggtatgcagacttggtgaac
tacttagcttctgggaaagaaccgttggggcttgaaggatatcagaggaagaaattcttc
aagggcgtcaagagatacttttgggatgagccatatctctatacgctgtgtaaggatcag
ctttacagaagagttgtagctgaggaagaaatatgcgactcatgccaaagaagaggtaac
atcagtaagagaaacgagatgcctcagaatccatttctggaagttgaggtgtttgatgtc
tggggcatagacttcatggggccatttcccatgtctttcggaaacaaatatatcttggtg
gctgtcgattacgtatccaaatgggttgaggcaattgctagtccaaccaatgattccaga
gtagtcatcaagatgttcaagaccatcatctttcctagatttggagtcccaagagttgtg
atcagtgatggaggatctcactttatcaacaaaatattcgagagcttaatgaaaaagaat
ggggttaagcataaggtagcaacaccttaccaccctcagactagtggacaggttgaggtt
tccaacagggagattaaagccatcctggagaaaactgtgggaacaacaaggaaagactgg
tctgtgaagttggatgatgcactctgggcatacataacagctttcaaaacaccacttggg
acaacgcctttcaactttgtctacggaaagtcttgccaccttccggtcgagcttgaatac
aaagccttgtggactgttaagctcctgaacttcaacatcaaaaccgccaaggagaagaga
ctgatccagttgcatgagctacatgaaatcaggcttgatgcctttgaaagctttaggatt
tacaaagagaagactaaggctttccatgataagaagatcttaaggcgagaattcaaggct
ggtgatcaagtactgttgtttaactctcggttgaagatttttgccggaaaactcaagtca
aggtggtcaagaccttttgtgatcaaggaagtaagaccgtatggagctgtggtgttgaca
ggaaagcgtggagaagattttacagtgaatggtcaatgtttaaagctctacatggctgat
caggagattggtgaggaagcctcggttcctctctctgaaccaatcccagcctaa
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integrated database retrieval system
