Bordetella sp. H567: AKI39_17860
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Entry
AKI39_17860 CDS
T04979
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
boh
Bordetella sp. H567
Pathway
boh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKI39_17860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_17860
Enzymes [BR:
boh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AKI39_17860
DNA repair and recombination proteins [BR:
boh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AKI39_17860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
AOB32177
UniProt:
A0A1B2R5C4
LinkDB
All DBs
Position
complement(3982429..3983544)
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AA seq
371 aa
AA seq
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MTDGTPVSAKAPLLNPLQRAWLREIGMEKVWLRQGEPEPRAPGVQADARTAAAGVAAAGT
GAGGVAGLRVAAGPHVDAGPHASAGPHGEAGTPAGSEGRSEAGAPAGAAGLPPQAPASAT
NQAPGIAPGPAANQAAGVASAAAPDAPARIPVVVPRPARPPALGARPAKDAPPPQPAPTA
ESLAMLDMATLRDRVIECTACGLCRGRRQAVFGMGAEQARWLVVGEAPGEQEDRQGLPFV
GRSGQLLDAMLAAVGMSRERDVYIANVIKCRPPGNRNPKPEEIAACRPYLMRQIALLKPE
RILVLGRFAAQTLLETDAAIGSLRGRVHTLKTADGEIPMVVSYHPAYLLRSPVEKARAWQ
DLRLAVSLLQS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgggacgcccgtatccgcgaaggcgccgctgctgaatccgctgcagcgggcg
tggctgcgcgagatcggaatggaaaaggtgtggctgcggcagggtgagcctgaaccccgc
gcacccggcgtacaggccgacgcccgcacggcggccgcgggtgtagccgcggccggcacg
ggcgccgggggggtggccgggttgcgcgtggccgccgggccgcatgtcgatgcgggccca
cacgccagcgccgggccgcatggcgaggctggcacgccagccgggtcggaaggtcgatcc
gaggcgggcgcccccgccggggcggcgggcctgccgccccaggcgccggcatccgcgacg
aaccaggcaccgggcatcgcgccggggcccgcggcgaaccaggccgccggcgtcgcgtcc
gcggccgcgccggatgcgccggcacggataccggtcgtggtgccgcgtccggccaggccg
cctgcgctcggcgcgcgtccggccaaggatgcgccgccgccgcagccggcgccaaccgcg
gaatcgctggcgatgctggacatggctaccttgcgcgaccgcgtgatcgaatgcacggcc
tgcggcttgtgccggggacgccggcaggcggtgttcggcatgggagcggaacaggcccgc
tggctggtggtcggcgaggcgccgggcgaacaggaagaccggcagggcctgcctttcgtg
ggccgctccggccagttgctggacgccatgctggcggccgtcggcatgagccgcgagcgc
gacgtctatatcgccaacgtcatcaagtgccggccgcccggcaatcgcaatcccaagcct
gaagaaatcgccgcgtgccggccatacctgatgcgccagatcgcgctactcaagccggaa
cgcatcctggtgctgggccgcttcgccgcccagacgctgctggagaccgatgccgccatc
ggcagcctgcgcgggcgcgtgcacaccttgaagacggcggatggcgagatacccatggtg
gtcagctaccacccggcgtatcttctgcgcagtccggttgaaaaggcgcgcgcctggcag
gacttgcggctggcggtgagcctgctgcagtcctag
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