Burkholderia oklahomensis E0147: DM82_880
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Entry
DM82_880 CDS
T03284
Name
(GenBank) Rhs element Vgr family protein
Organism
bok
Burkholderia oklahomensis E0147
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
DUF2345
T6SS_Vgr
Phage_base_V
DUF6484
Sarcoglycan_1
ImpE
Motif
Other DBs
NCBI-ProteinID:
AIO67205
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All DBs
Position
1:1004317..1007115
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AA seq
932 aa
AA seq
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MSVITQFTSFFGAANRLYSLDGPGELASLQIERWVGHDALSDNFRWDVYALATDPGLDLD
AMLGQRVTIGTALSDGTSALRSGLVAEAECIGYDAGLARYYLQLVPWLAALTHGRDERTF
VRQSVADVLGAVFAPYGAIARWRFTADANQRIAELGACDYRVQYRTHTHFDFVRHVLAEA
GLGFCFVEDADAPAGHTLLIFDDSTQLPEDDTSARAGGVPQRLSGMATEPDDVIVGIGQS
LSLTADRVTLISSDYRSNQSTTATASLGSPSGSRELYDDVGPEAFDSLRDAEDAARRHAE
AIVSGARFWTGYSTLRTARAGRALRIANATWRMPRGGAPVPDAFVLTRVEQVGVNNLPAT
VMERVERSLGPLPLANLDARVLEQARAGGYANRFDAAPREQVWRPTLEDGTGQRLNPAPT
ALGAQTAIVVGPRGESRPGSTGPVHTDAQGRLRLRYHWQADGDTGTYPTRAMQRLASQGH
GLQQTQRIGHEVLVQFLNGLVHRPIVLGGLFNGRGEGGESPTPGGEAGQPFDESVYTQAA
DHAASAQGNLAGGHSPAWHGAGGGAKRHDHAGALSGFKSRGFDGQGYNQLVADDTDRMGR
MQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYGALRGARGMLLSSYAPTGPS
QPAGDVSALQSLLAQQATLAKLLDKSADTHKTLPFAAQRGAEKAGQSSMNSDAAPLDALR
KSFATTVGAHGYAQASADASSRSTGNALPHTGDAVLGIEAKGGQGLLAGQSLQWAAGETL
TIGSGNDTNLGVNRTLRIHSGQGIGWLAGASNANGVGMSVISGKDDLTLQAQHDAIALRA
RDDLKVASVNADVEIAAKQTVHLAVSGGAHLTIEGGNVTFGCPGSLVVHAAQHAFVGPDQ
LDTALPQFPEKVCVECLKHAMQSGSALAGKAV
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatcacgcaattcacgtcgtttttcggcgccgccaatcgtctctattccctc
gacggtccaggcgaactcgcgtcgctgcagatcgagcggtgggtggggcatgacgcgctc
tccgacaatttccgatgggacgtctacgcgctcgcgaccgatcccggtctcgatctcgac
gcgatgctcgggcagcgcgtgacgatcggcactgcgctgtcggacggcacgagcgcattg
cgcagcgggctcgtggcggaagccgagtgcatcggctatgacgccggcctcgcgcgctac
tacctgcagctcgtgccctggctcgccgcgctgacgcacggacgcgacgagcgcacgttc
gtcaggcagagcgtcgcggacgtgctcggcgcggtgttcgctccgtacggcgcgatcgcc
cgctggcgtttcacggcggacgcgaaccagcgcatcgcggaactcggcgcgtgcgattac
cgtgtgcaataccgaacccacactcacttcgatttcgtccggcacgtgttggccgaggcg
ggcctcggcttttgcttcgtcgaggatgcggacgcgccggccggccacacgctgctgatc
ttcgacgacagcacgcagttgcccgaggacgacacatccgcgcgcgcgggcggcgtgccg
cagcgcctgagcggaatggcgaccgagccggacgacgtgatcgtcggcatcgggcagtcg
ctgtcgctgaccgcggatcgcgtcacgctgatcagcagcgactaccgcagcaatcagtcg
acgacggcgacagcgagcctcggcagcccgtccgggtcgcgcgagctgtacgacgacgtc
ggaccggaggcgttcgacagcctgcgcgatgccgaagacgccgcgcggcggcatgcggag
gcgatcgtttccggcgcgcgcttctggaccggctacagcacgttgcgcaccgcgcgcgcc
ggccgtgcgctgcgcatcgccaacgcgacgtggcgcatgccgcgcggcggcgcgccagtg
ccggacgcgttcgtgctgacacgcgtcgaacaagtcggcgtcaacaatttgccggcgact
gtcatggagcgcgtcgagcgcagcctcggcccgctgccgcttgcgaacctcgacgcgcgc
gtgctcgagcaggcgcgggcaggcggctatgcgaaccgtttcgacgccgcgccgcgcgag
caggtctggcgtccgacgctcgaagacggcaccgggcagcggctgaatccggcgccgacg
gcgctcggcgcgcaaacggcgatcgtggtcggcccgcggggcgagtcgcggccgggctcg
acgggaccggtgcacaccgatgcgcagggccggctgcggttgcgctatcactggcaggcg
gacggcgacaccggcacctacccgacgcgcgcgatgcagcgtctcgcgagccaggggcat
gggctgcagcagacgcagcggatcggtcacgaggtgctcgtgcagttcctcaacgggctg
gtgcatcggccgatcgtgctcggcgggctgttcaacggccgcggcgaaggcggcgagtcg
ccgacgcccggcggcgaagcggggcagccgttcgacgaatcggtctatacgcaggccgcc
gatcacgcggcgagcgcgcaaggcaatctcgcgggcggccatagcccagcgtggcacggc
gcgggcggcggcgcgaagcgtcacgatcatgcgggcgcgctgtccggcttcaagagccgg
ggattcgacggccagggctacaaccagctcgtcgcggacgataccgaccgcatgggccgc
atgcagatggcgacgacgcatgcggcgacccagctcaacatcggccacttgcgccatcag
gccgacaactatctcggcagcttccgcggacagggcgtcgagctgcgctcggacgcgtac
ggcgcgctgcgcggcgcgcgcgggatgctgctctccagctatgcgccgacgggcccgtcg
cagccggcgggcgacgtctcggcgctgcagtcgctgctcgcgcagcaggcgacgctcgcg
aagcttctcgacaagtcggccgatacgcacaagaccttgccgttcgccgcgcagcgcggc
gcggagaaggccggccagtcttcgatgaacagcgacgccgcgccgctcgacgcgctccgg
aagagcttcgcgacgacggtcggcgctcacggctacgcgcaagcgtcggccgacgcgtca
agccgctcgacgggcaacgcgctgccgcataccggcgacgccgtgctagggatcgaagcg
aagggcggccagggattgctggccggccagtcgctgcaatgggcggcgggcgagacattg
acgatcggcagcggcaacgacaccaacctcggggtcaatcggacgctgcgcatccacagc
gggcaggggatcggctggctcgccggcgcgagcaatgcgaacggcgtcggcatgagcgtg
atctccggcaaggacgatctgacgctgcaggcgcagcacgacgcgatcgcgctgcgtgcg
cgcgacgatttgaaagtggcgtccgtcaatgcggacgtcgagatcgcggcaaagcagacc
gtgcaccttgcggtcagcggcggcgcgcatctgacgatcgagggcggcaacgtcaccttc
ggctgcccggggtcgctcgtcgtgcacgcggcgcagcacgcgttcgtcggtccggatcaa
ctggataccgcgctgccgcagttccccgagaaggtctgcgtcgagtgcctgaaacacgcg
atgcagtcgggcagcgcattggccggcaaggcggtctga
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