Bos mutus (wild yak): 102265105 Help Entry 102265105         CDS       T02919                                  Symbol COL1A1 Name (RefSeq) collagen type I alpha 1 chain   KO K06236   collagen type I alpha Organism bom  Bos mutus (wild yak) Pathway bom04151   PI3K-Akt signaling pathway bom04510   Focal adhesion bom04512   ECM-receptor interaction bom04611   Platelet activation bom04820   Cytoskeleton in muscle cells bom04926   Relaxin signaling pathway bom04933   AGE-RAGE signaling pathway in diabetic complications bom04974   Protein digestion and absorption bom05146   Amoebiasis bom05165   Human papillomavirus infection bom05205   Proteoglycans in cancer bom05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:bom00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102265105 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102265105 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102265105 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102265105 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     102265105 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     102265105 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     102265105 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     102265105 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102265105 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     102265105 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     102265105 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102265105 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bom00536]     102265105 (COL1A1) Glycosaminoglycan binding proteins [BR:bom00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102265105 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  102265105 NCBI-ProteinID:  XP_005890387 LinkDB All DBs Position Un AA seq 1472 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEGQEEDIPPVTCVQNGLRYHDRDVWKPVPCQI CVCDNGNVLCDDVICDELKDCPNAKVPTDECCPVCPEGQESPTDQETTGVEGPKGDTGPR GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGISVPGPM GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEGGPQGPR GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ GPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLP GPPGERGGPGSRGFPGADGVAGPKGPAGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLT GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVP GPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQ GVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQ GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDK GEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPP GPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPA GKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVV GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE GSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPV GARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR GPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPPGPPSGGYDLSFL PQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRD LKMCHSXXXXXXXXXXXXSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNW YISKNPKEKRHVWYGESMTGGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKN SVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTT KTSRLPIIDVAPLDVGAPDQEFGFDVGPACFL NT seq 4419 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaggaagaaggccaagaagaagacatcccaccagtcacctgc gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgtgccctgccagatc tgtgtctgcgacaacggcaacgtgctgtgcgatgacgtgatctgcgacgaacttaaggac tgtcctaacgccaaagtccccacggacgaatgctgccccgtctgccccgaaggccaggaa tcacccacggaccaagaaaccaccggagtcgagggaccgaaaggagacactggcccccga ggcccaaggggacccgccggcccccccggccgagatggcatccctggacaacctggactt cccggaccccctggaccccccggacctcccggaccccctggcctcggaggaaactttgct ccccagttgtcttacggctatgatgagaaatcaacaggaatttccgtgcctggtcccatg ggtccttctggtcctcgtggtctccctggcccccctggcgcacctggtccccaaggtttc caaggcccccctggtgagcctggcgagccaggagcctcaggtcccatgggtccccgtggt ccccctggcccccctggcaagaacggagatgatggcgaagctggaaagcctggtcgtcct ggtgagcgcgggcctcccggacctcagggtgctcggggattgcctggaacagctggcctc cctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggt cctgctggccccaagggcgagcctggtagccccggtgaaaatggagctcctggtcaaatg ggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgct cgaggaaatgatggtgcgactggtgctgctgggccccctggtcccactggccccgctggt cctcctggtttccctggtgctgtgggtgctaagggtgaaggtggtccccaaggaccccga ggttctgaaggtccccagggtgtacgtggtgagcctggcccccctggccctgctggtgct gctggccctgctggcaaccctggtgctgatggacagcctggtgctaaaggagccaatggc gctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccccag ggccccagcggcccccctggccccaagggtaacagcggtgaacctggtgctcctggcagc aaaggagacactggcgccaagggagaacccggtcccactggtattcaaggcccccctggc cccgctggggaagaaggaaagcgaggagcccgaggtgaacctggacctgctggcctgcct ggaccccctggcgagcgtggcggacctggtagccgtggtttccctggcgccgacggtgtt gctggtcccaagggtcctgctggtgaacgcggtgctcctggccctgctggccccaaaggt tctcctggtgaagctggtcgccccggtgaagctggtctgcccggtgccaagggtctgact ggaagccctggcagcccgggtcctgatggcaaaactggcccccctggtcccgccggtcaa gatggccgccctggacccccaggccctcccggtgcccgtggtcaggctggcgtgatgggt ttccctggacctaaaggtgctgctggagagcctggaaaagctggagagcgaggtgttcct ggaccccctggcgctgttggtcctgctggcaaagacggagaagctggagctcagggaccc ccaggacctgctggccccgctggtgagagaggcgaacaaggccctgctggctcccctgga ttccagggtctccccggccctgctggtcctcctggtgaagcaggcaaacctggtgaacag ggtgttcctggagatcttggtgcccccggcccctctggagcaagaggcgagagaggtttc cccggcgagcgtggtgtgcaagggccgcccggtcctgcaggtccccgtggggccaatggt gcccctggcaacgatggtgctaagggtgatgctggtgcccctggagcccccggtagccag ggtgcccctggccttcaaggaatgcctggtgaacgaggtgcagctggtcttccaggccct aagggtgacagaggggatgctggtcccaaaggtgctgatggtgctcctggcaaagatggc gtccgtggtctgactggtcccatcggtcctcctggccccgctggtgcccctggtgacaag ggtgaagctggtcctagcggcccagccggtcccactggagctcgtggtgcccccggtgac cgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggc caacctggtgctaaaggcgaacctggtgatgctggtgctaaaggtgacgctggtcccccc ggccctgctgggcccgctggaccccccggccccattggtaacgttggtgctcccggaccc aaaggtgctcgtggcagtgctggtccccctggtgctactggtttcccaggtgctgctggc cgagtcggtccccccggcccctctggaaatgctggaccccctggccctcctggccctgct ggcaaagaaggcagcaaaggcccccgcggtgagactggccccgctgggcgtcccggtgaa gtcggtccccctggtccccctggccccgctggtgagaaaggagcccctggtgctgacgga cctgctggagctcctggcactcctggacctcaaggtattgctggacagcgtggtgtggtc ggcctgcctggtcagagaggagaaagaggcttccctggtcttcctggcccctctggtgaa cccggcaaacaaggtccttctggagcaagtggtgaacgtggcccccctggtcccatgggc ccccctggattggctggaccccctggcgagtctggacgtgagggagctcctggtgctgaa ggatcccctggacgagatggttctcctggcgccaagggtgaccgtggtgagaccggccct gctggacctcctggtgcccctggcgctcccggtgcccccggccctgtcggacctgctggc aagagtggtgatcgtggtgagaccggtcctgctggtcctgctggtcccattggccccgtt ggtgcccgtggccccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaa cagggcgacagaggcattaagggtcaccgtggcttctctggtctccagggtccccccggc cctcccggctctcctggtgagcaaggtccttccggagcctctggtcctgctggtccccgc ggtccccctggctctgctggttctcccggcaaagatggactcaatggtctcccaggcccc atcggtccccctgggcctcgaggtcgaactggtgatgctggtcctgctggtcctcctggc cctcctggaccccctggtcccccaggtcctcccagcggcggctacgacttgagcttcctg ccccagccacctcaagagaaggctcacgatggtggccgctactaccgggctgatgatgcc aatgtggtccgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcag atcgagaacatccggagccctgaaggcagccgcaagaaccccgcccgcacctgccgtgac ctcaagatgtgccactctgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcgga gaatactggattgaccccaaccaaggctgcaacctggacgccattaaggtcttctgcaac atggaaaccggtgagacctgtgtgtaccccactcagcccagcgtggcccagaagaactgg tatatcagcaagaaccccaaggaaaagaggcacgtctggtacggcgagagcatgaccggc ggattccagttcgagtatggcggccaggggtccgatcctgccgatgtggccatccagctg actttcctgcgcctgatgtccaccgaggcctcccagaacatcacctaccactgcaagaac agcgtggcctacatggaccagcagactggcaacctcaagaaggccctgctcctccagggc tccaacgagatcgagatccgggccgagggcaacagccgcttcacctacagcgtcacctac gatggctgcacgagtcacaccggagcctggggcaagacagtgatcgaatacaaaaccacc aagacctcccgcttgcccatcatcgatgtggcccccttggacgttggcgccccagaccag gaattcggcttcgacgttggccctgcctgcttcctgtaa

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