Bosea sp. PAMC 26642: AXW83_24315 Help Entry AXW83_24315       CDS       T04264                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism bop  Bosea sp. PAMC 26642 Pathway bop03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:bop00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AXW83_24315  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bop03400]     AXW83_24315 Enzymes [BR:bop01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AXW83_24315 DNA repair and recombination proteins [BR:bop03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AXW83_24315 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M RNA_ligase Motif Other DBs NCBI-ProteinID:  AMJ63004 UniProt:  A0A126P1J3 LinkDB All DBs Position complement(5095121..5097796) Genome browser AA seq 891 aa AA seqDB search MPRRCALEKLKAYRQKRDFEKTKEPDGEASVAASNRLRFVIQKHDATRLHYDLRLELDGV FRSWAVTKGPSLDPGDKRLAVEVEDHPLPYGDFEGTIPKGQYGGGTVQLWDRGYWEAEGK LSPEKQLEKGELKFVLAGERLHGSFVLVRMRHDRNGGKRTNWLLIKHRDEHAVESHGDAV LADDKSVASGRSMATIAAGKGRSPKPFMLDDDILAPDAEWDSQKGLAANKRHEPTKPASR SKSPSPKAPASHKSVASVALPAFIAPQLCRSIERPASGTDWVHEIKFDGYRIQMRIDAGK VTLKTRNGLDWTQKFGAIAKAAKGLPDAIIDGEIVALDSHGSPDFAALQAALSENKTDDL VFFAFDMLFDKDTDLRERPLLQRKEQLKAYLEDHADGVVLRYVEHFETGGDAVLKSACKL SLEGIVSKAVDAPYISGRSDTWTKSKCRAGHEVVIGGWSTTEGKFRSLLVGVNRGSHFVY VGRVGTGYSAAKVDALLPKLKAVAAEASPFTGVGAPKREPGVTWLKPELVAEIEFAGWTG DGMVRQAAFKGLREDKPADEVETELPADPAETQTPEPRPARARGRGGRADVMGVGISHPN KPLWPDAEDGKPVSKQDLAEYFGAVGDWMLPHIKGRPCSLVRAPDGIGGEMFFQRHAGMG TSNLFELVRVFGDKKPYLQIDRIEALAAAAQVGGIELHPWNCLPGDPETPGRLVFDLDPG PGVTFGDVIDAAKQMRERLEALGLVSFCKTTGGKGLHVVTPLASGKRATVDWPAAKDFAR RVCAELASEEPARYVINMAKRLRNGRIFLDYLRNDRMATAVAPLSPRARPGAHASMPLTW SQVKADLDPSRFTVRTLPGVLRKTKAWEGYDDAAGSIADAIKKLGKRSEAA NT seq 2676 nt NT seq  +upstreamnt  +downstreamnt gtgccgcggaggtgtgcgttggaaaagctgaaggcgtatcgccaaaagcgcgatttcgag aagaccaaggagcccgatggcgaagcctccgtcgccgcgtcgaaccgcctgcggttcgtg atccagaagcatgacgcaacccgtctgcactacgatctgcggctggaactcgatggcgtc tttcgctcctgggctgtgaccaagggaccctcgctcgatcccggcgacaagcggttggcc gtcgaggtggaggatcacccgctgccctacggcgatttcgaaggcaccatcccgaagggg cagtatggcggcggaacggtccagctctgggatcgtggctactgggaagccgaaggcaag ctcagccctgaaaagcaacttgagaaaggcgagctcaaattcgtcctcgccggggagcgc ctgcacggcagcttcgtcctcgtccgcatgcgccacgatcgcaatggcggtaagcgaacc aactggcttcttatcaagcaccgcgacgaacatgccgtcgaaagccatggcgacgcggtc ctggccgacgacaagtcggtggcctcaggccgtagcatggcaacgatcgctgcaggcaag ggacgctcgcccaagcctttcatgctggacgacgatattctcgcccctgacgcggagtgg gacagtcagaaaggactggcagcgaacaagaggcacgaaccgactaagcccgcgtctagg tcgaaatctccgtcgcctaaggcgcctgcctcccacaagtccgtcgcttcggttgccctt ccagccttcatcgcgccacaactctgtcggagcatcgagcgtcccgccagcggcaccgat tgggtccacgagatcaaattcgacggctatcgcatccagatgcggatcgacgccggcaag gtgaccttgaaaacgcggaatggtctcgactggacccaaaagttcggcgcgatcgcgaag gcggccaagggtctccctgacgccatcattgatggcgagatcgtggcgctcgacagtcac ggctcgccggattttgcagcgcttcaggccgccctttccgagaataagactgatgatctg gtcttcttcgccttcgatatgctgttcgacaaggataccgatctgcgcgagcgacctctg ctgcaacgaaaagagcagttgaaggcgtatctggaggatcatgctgacggtgtcgtgctg cgctatgtcgagcatttcgagacaggtggcgatgcggtcctgaaatcggcctgcaagctg tccctggaaggcatcgtctccaaggccgtcgatgcaccctacatttccggtcgaagtgac acatggacgaagtccaagtgccgggctggccatgaggtcgtgatcggaggctggtccaca accgaaggcaagttcagatcgctcctcgtcggcgtcaaccggggctcccatttcgtctat gtcggccgtgtcgggaccggctacagcgcggcgaaggtggatgcattgctgccgaagctc aaggccgtcgccgcggaggcatcgcccttcaccggcgtaggcgcgcccaagcgtgagccg ggcgtgacctggctgaagccggagctggtcgccgagatcgagttcgccggctggaccggt gacggcatggtccgccaggcggcgttcaaggggctgcgcgaggacaagccggcggacgag gtcgagaccgaattgcctgccgatccggcagagacgcagacgcctgagcccaggcccgct cgcgctcgcggacgcggtggcagggccgatgtcatgggcgttggcatcagccaccccaac aagccgctgtggcccgatgccgaagatggcaaacccgtctccaagcaggatctggccgag tatttcggagcggtcggcgactggatgctgccgcatatcaaaggcaggccctgctccctc gttcgcgcacctgatgggatcggcggcgaaatgtttttccagcgccatgccggcatgggg acgtcgaacctgttcgagctcgtccgggtcttcggcgacaagaagccctatctccagatc gaccggatcgaggcgctggctgcggccgcccaagtcgggggtatcgaactccacccctgg aactgcctccccggcgatccggagacgcccgggcgtctcgtcttcgatctggatcccggg cctggcgtgaccttcggcgatgtgatcgacgctgccaagcagatgcgtgagcggctcgag gcgctgggcctcgtcagcttctgcaagaccacgggcggcaagggccttcacgtcgtgacg cctttggcgtcgggcaagcgcgccaccgtcgattggccggcggccaaggacttcgcacgg cgggtctgtgccgagctagcaagcgaggagccggcgcgctatgtcatcaacatggccaag cggcttcgaaacggccgcatctttctcgactatctccgcaacgaccgaatggcgaccgcc gtcgcacccttgtcgcccagggcgcgtccaggcgcccatgcgtcgatgccgctcacctgg tcgcaagtgaaggccgatctcgatccgagccgcttcaccgtcaggaccctgcctggcgtg ctgaggaagaccaaggcttgggagggctacgacgacgcggcggggtcgatcgccgacgcc atcaagaagctcggcaagcgtagtgaggcggcctaa

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