Bipolaris oryzae: COCMIDRAFT_106705
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Entry
COCMIDRAFT_106705 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
bor
Bipolaris oryzae
Pathway
bor04111
Cell cycle - yeast
bor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCMIDRAFT_106705
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
COCMIDRAFT_106705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bor04121
]
COCMIDRAFT_106705
Ubiquitin system [BR:
bor04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
COCMIDRAFT_106705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
F-box-like
NBCH_WD40
ANAPC4_WD40
F-box
Nup160
WD40_like
PQQ_2
Motif
Other DBs
NCBI-GeneID:
19118907
NCBI-ProteinID:
XP_007692251
JGI:
Cocmi1_106705
UniProt:
W6YUL5
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MDPDYFAPVREDQDAAGAPIEDSDTDMAASASATASSSRSAMYTSPSVHGRKGRMSRSGA
PRPIITPTSPLSSTIPHNLLPSAPASPPTPAPSPTPTQRVPDWSTAAEHEDGDIKSIRAQ
FGDMNRAERMRLLGELLNLCDSQELSFVAEFVSPRLKKDPFMVLPTELCLRILECVDDPT
TLARASQVSKKWRELVNDDSAWRLLCQKFSFRALPKQDNMEEDEPTDQMEDAESKPWWHD
DERTARLDDASSARDHLEVGPSNSSPEGLRTQSLDRAAKRKPSQRKQQATTYRSHFKQRY
MVETAWRNGGVCDARQITPDQGVVTSLHLTNKYIVVALDNAKIHVFDTVGDHQKTLQGHV
MGVWAMVPWGDLLVSGGCDRDVRVWNLATGFPQFTLRGHTSTVRCLKMSDANTAISGSRD
TTLRIWDLKKGLCKHVLIGHQASVRCLEIHGDIVVSGSYDTTAKIWSISEGKCLRTLTGH
FSQIYAIAFDGKKIATGSLDTSVRIWDPNDGKCLAVLQGHTSLVGQLQMRDDILVTGGSD
GSVRVWSLATYQAIHRLAAHDNSVTSLQFDNTRIVSGGSDGRVKVWDLKTGVPVRELSSP
AEAVWRVVFEEEKAVIMASRGGRTIMEVWDFSPPAEEDYDSRSSTPASMPDRLEVDYNRP
RSAILPAPSPLVQDTSAGDVTMDDVTDP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgactacttcgcgccggtgcgagaagaccaggacgctgccggcgcccccatc
gaggactcggacacagacatggccgcctctgccagcgcaacagcctcatcctcgcgatcc
gccatgtacacctcacccagcgtccacgggcgcaaaggccgcatgtctcgctcaggagca
cccaggcccataatcacacccaccagtcctctttcctcgacgattccccataatctgcta
ccctcggcgcccgcctcgccgcccacacccgcgccaagtcctacgccaacgcagcgggtg
ccggactggagtaccgccgccgaacacgaagatggcgatatcaagagcatacgggcacag
tttggcgatatgaaccgggcagagcgcatgcggctgctcggcgagctgctcaacctgtgc
gacagccaagagttgagcttcgttgccgagtttgtcagtcccagactaaagaaggaccca
ttcatggtcctgcccactgaactctgtttgagaatactcgaatgtgtagatgaccctacc
actctggctcgggcatcgcaagtatccaagaaatggcgtgagctagtcaatgacgacagt
gcttggcggttgctctgccaaaagttctccttcagagcgctaccaaaacaggacaacatg
gaagaagatgagccaaccgaccaaatggaagatgcagagtcgaagccgtggtggcacgat
gatgagcgcacggccaggctggacgatgcatcgtcggcacgcgaccaccttgaagtcgga
ccctcaaatagcagtccagaaggactgcgaacgcaaagcctcgaccgtgcagctaagagg
aagccatcgcaacgaaagcagcaggccactacatatcgatcacatttcaagcagcggtat
atggtggagactgcatggcgcaacggcggagtgtgtgacgcgcgacagatcaccccggac
cagggcgtggtgactagcttacatttgactaacaagtacattgttgttgcgcttgacaat
gccaagatacacgtattcgataccgtcggcgaccaccaaaagacgctccaaggacacgtc
atgggcgtgtgggcaatggtgccgtggggcgatctcctagtcagtggaggatgcgaccgc
gatgtgcgcgtctggaatcttgcaactggttttccacaattcaccctccgtggtcacacg
tcaacagtgcgatgcctgaaaatgtccgatgccaatacggccatctccggatccagggac
accacactacgcatctgggacctgaagaagggactgtgcaagcacgtacttattggccac
caagccagcgtccggtgtctcgagatacacggtgacattgttgtgtccggaagctatgac
actacagctaagatttggagcatatcagagggcaagtgccttcgcacattgaccggacat
tttagccagatttatgccattgcctttgacggcaagaagattgcaacaggaagtttggac
accagcgtccgcatatgggatcccaatgatggtaaatgtcttgctgtactacagggccac
acctcgcttgttggacagcttcaaatgcgtgatgatatccttgtgactggtggatcagac
ggatcggtccgtgtgtggagccttgcaacctaccaagccattcaccgattagccgcgcac
gacaacagcgtcacgagtctgcaatttgacaatacgagaattgtcagcggcggtagcgat
ggccgtgtcaaggtctgggatctcaagactggcgttcctgtgcgagagttgagcagccct
gcagaggctgtctggagggtggtatttgaggaagagaaggctgtcattatggctagtcgg
ggcggtcggaccatcatggaggtatgggacttttcaccgcccgctgaagaagattacgac
tcgcgatcgtctaccccagcaagtatgcctgatcgtctcgaagtcgactataatcgtcca
cggtctgccattctccctgcaccctcgccgttagtacaagacacaagtgccggcgacgtt
accatggacgacgtaacagatccataa
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integrated database retrieval system