Bradyrhizobium ottawaense: CIT37_30625
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Entry
CIT37_30625 CDS
T05524
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIT37_30625 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bot03400
]
CIT37_30625 (uvrA)
DNA repair and recombination proteins [BR:
bot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIT37_30625 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIT37_30625 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
BCA_ABC_TP_C
AAA_21
DnaJ_CXXCXGXG
AAA_23
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AWL96003
UniProt:
A0A2U8PE00
LinkDB
All DBs
Position
complement(4202854..4205829)
Genome browser
AA seq
991 aa
AA seq
DB search
MDEVIKAKRQQQNAGSSLRAITIRGAREHNLKNIDVEIPRDKLVVFTGLSGSGKSSLAFD
TIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTE
IYDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLALPEGTRLYLLAPVVRGRKGEYR
KELAEWLKKGFQRVKIDGTFHELAEAPVLDKKFPHDIDVVVDRIVVRADIGQRLAESFET
ALKLAEGLAVVEFADAPAAAPAEEKKKTAKIHDKSGPERILFSEKFACPVSGFTIPEVEP
RLFSFNNPYGACPACGGLGVEQHVDEDLVIPDKELAIGKGAIAPWAKSSSPYYVQTLTAL
GKHYKFTLTTKWKDLAKKTQNAILHGSGEDEIKFSYEDGVRSYDTKKPFEGVITNINRRY
RETESEWAREELAKYFHDVPCEGCKGFRLKPEALCVKIGGKHIGEISELSVKGAGAWFET
VPEALNAQQNEIAGRILKEIRERLTFLLDVGLNYLTLSRSSGTLSGGESQRIRLASQIGS
GLTGVLYVLDEPSIGLHQRDNARLLDTLKRLRDLGNTVIVVEHDEDAILLADHVLDIGPG
AGMHGGNIIAEGTPAEIMRNPKSLTGKYLTGELEVEVPERRPPNHRRTIKVVNARGNNLK
NVTAEIPLGLFTAVTGVSGGGKSTLLIDTLYKSIARKLNNASEGAAPHDRIEGLEHIDKI
IDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPESKARGYEPGRFSFNVKGGRCEACQG
DGVIKIEMHFLPDVYVTCDVCKGKRYNRETLEVLFKGKSIADVLDMTVEEAAEFFKAVPR
VRETFQTLHRVGLDYIHVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHF
HDVKKLLEVLHELVAQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAWGPPEDIA
KAPRSYTGKFLEPVLKKARKPKRRSTSEAAE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtgatcaaggcgaagcgccaacaacagaacgcgggctccagcctgcgcgca
attacgatccgtggcgcgcgcgagcacaacctcaagaacatcgacgtcgagattccccgc
gacaagctggtggtgttcaccggcctctccggctccggcaaatcctcgctcgccttcgac
accatctacgccgagggccagcgccgctacgtcgaatcgctgtcggcctatgcgcgccag
ttcctcgagatgatgcagaagcctgacgtcgaccagatcgacggcctgtcgccggcgatc
tcgatcgagcagaagacgacgtcgaagaacccgcgctccaccgtcggcaccgtcaccgag
atctacgactacatgcgcctgctctgggcccgcgtcggcgtgccctattcgccggccacg
ggcctgccgatcgaaagccagaccgtctcgcagatggtcgaccgcgtgctggcgctgccc
gagggcacccgcctctatctgctcgcgcccgtcgtgcgcggtcgcaagggcgagtaccgc
aaggagctcgccgaatggctcaagaagggctttcagcgcgtcaagatcgacggcaccttc
cacgagcttgcggaagcgcctgttctcgacaagaaattcccgcacgacatcgacgtcgtg
gtcgatcgtatcgtggtgcgcgccgacatcggccagcgcctcgccgagagctttgagacc
gcgctgaaactcgccgaaggcctcgccgtcgtcgaattcgccgacgcgccggcggcggct
cccgccgaggaaaagaagaagaccgccaagatccacgacaagagcggacccgagcgcatc
ctgttctcggaaaagttcgcctgcccggtctctggcttcaccattcccgaggtcgagccg
cgcctgttctcgttcaacaacccctatggcgcgtgtccggcctgcggcggcctcggcgtc
gagcagcatgtcgacgaagacctcgtcatccccgacaaggagctcgcgatcggtaagggc
gcgattgcgccctgggccaaatcgtcgtcgccctattacgtgcagacgctgactgcgctc
ggcaagcactacaaattcacgctgaccaccaagtggaaggacctggccaagaagacgcag
aacgccatcctccacggctccggcgaggacgagatcaagttctcctacgaggacggggtg
cgctcctacgacaccaagaagccgttcgagggcgtcatcaccaacatcaaccgccgctat
cgggaaaccgagagcgagtgggcgcgcgaggagctggcgaagtatttccacgacgtgccc
tgcgagggctgcaagggctttcggctcaagcccgaggcgctctgcgtcaagatcggcggc
aagcatatcggcgagatttccgagctgtcggtgaagggcgccggcgcatggttcgagacc
gtgcccgaggcgctcaacgcgcagcagaacgagatcgccggccgcatcctgaaggagatc
cgcgagcgtctcaccttcctgctcgacgtcggcctcaactacctcaccctctcccgctcc
tccggcacgctgtccggcggcgagagccagcgcatccgcctggcctcgcagatcggctcg
ggcctgacgggcgtgctctacgtgctggacgagccctcgatcggcctgcaccagcgcgac
aacgcgcgcctgctcgacaccctcaagcggctgcgcgacctcggcaacaccgtgatcgtg
gtcgagcatgacgaggacgccatcctgctcgccgaccacgtcctcgacatcggccccggc
gccggcatgcatggcggcaacatcattgccgaaggcacgcccgccgagatcatgcgcaac
ccgaaatcgctcaccggcaagtacctgaccggcgagctcgaggtcgaggtgccggagcgg
cggccgccgaaccatcgccgcaccatcaaggtggtcaatgcgcgcggcaacaatctcaag
aacgtcaccgccgaaattccgctcggcctgttcaccgccgtcaccggcgtgtccggcggc
ggcaagtcgacgctgctgatcgacacgctctacaagtccatcgcccgcaagctgaacaat
gccagcgagggtgcggccccgcacgaccgcatcgagggcctcgagcacatcgacaagatc
atcgacatcgaccagtcgccgatcggccgcaccccgcgctccaaccccgcgacctatacc
ggtgccttcacgccgatccgcgaatggttcgccggcctgcccgaatccaaggcgcgcggc
tacgagcccggccgcttctccttcaacgtcaagggcggccgctgcgaggcgtgccagggc
gacggcgtcatcaagatcgagatgcacttcctgcccgacgtctacgtcacctgcgacgtc
tgcaagggcaagcgctacaaccgcgagacgctggaggtgctattcaagggcaagagcatc
gccgacgtcctcgacatgaccgtcgaggaagccgccgagttcttcaaggcggtgccgcgc
gtgcgcgagacgtttcagaccctgcaccgcgtcgggctcgattacatccacgtgggccaa
caagcgacgaccctctcgggcggtgaagcccagcgcgtcaagctcgccaaggagctgtcg
aagcgcgccaccggccgcacgctctacatcctggacgagcccaccaccggcctgcacttc
cacgacgtcaagaagctcctggaagtgctgcacgagctcgtcgcgcagggcaatacggtc
gtcgtcatcgagcacaatctcgaagtcatcaagaccgccgactgggtcatcgacctcggc
cccgaaggcggcgacggcggcggcgagatcgtcgcctggggcccgccggaggacattgcc
aaggcgccgcggagctacacgggcaagtttctggagccggtgctgaagaaggcgaggaag
ccgaagcgaaggagcacgagcgaggcggcggagtag
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