Orrella marina: DBV39_10280
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Entry
DBV39_10280 CDS
T05532
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
boz
Orrella marina
Pathway
boz00540
Lipopolysaccharide biosynthesis
boz01100
Metabolic pathways
boz01250
Biosynthesis of nucleotide sugars
Module
boz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
boz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DBV39_10280 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
boz01005
]
DBV39_10280 (rfaD)
Enzymes [BR:
boz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DBV39_10280 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
boz01005
]
Core region
DBV39_10280 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AWB34037
UniProt:
A0A2R4XJL2
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Position
complement(2261226..2262239)
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AA seq
337 aa
AA seq
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MIIVTGAAGFIGSNLVRGLNARGYRNILAVDDLTDGDKFVNLVGCQVADYLHKDEFRRLV
TENALSKVEAVFHQGACSDTTERNGQYMMDNNYRVTRELFEWAQSRRVPFIYASSAAVYG
AGPNYVEALANEKPLNVYGYSKFLFDQVVRGRSDRLAAQAVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLTSGSVRLFAGWDGYDDGGQMRDFISVDDVVSVNLHFLEHPEINGIFNCG
TGRAQPFNDVASSVVNTLRELRGQEKLSLGDLVNEGLIQYVPFPDDLKGRYQSYTQADMS
ALRASGYTAEFKSVQSGVADYIRYQVSNGHLMLDSAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtgactggggcagcggggtttatcgggtccaatctggtacggggactcaat
gcccgcgggtacagaaatattctggcggtcgacgacctgacggacggagacaagtttgtg
aatctggttggctgtcaggtggcagattaccttcacaaggacgagtttcgacgtctcgtc
actgagaatgcactgagtaaggtagaggctgtcttccaccagggagcgtgctcggatacg
acggagcgcaacggtcaatacatgatggacaacaactaccgcgtcacccgcgagttgttc
gaatgggctcagtcgcggcgagtccctttcatttatgcatcgtctgcagctgtctatggc
gccggaccgaactatgtcgaggcgctggccaatgagaagccactgaacgtctatggatat
tcaaaattcctgtttgatcaggtcgttcgcggtcggtccgacaggctcgcagcgcaggct
gtcggactacgatactttaatgtgtatgggccgcacgagcagcataagggtcggatggct
tctgtggcgttccacaatatgaaccagtttctgacctctggtagtgtcagattgtttgct
ggctgggatggatacgatgacggtggacagatgcgggacttcatttcagttgatgatgtc
gtatcggtcaatctgcattttctggaacacccggaaatcaacgggatcttcaattgcggg
acagggcgtgcccagcctttcaatgacgtggcgtcttcggtggtgaataccctgagagag
ttgagggggcaggaaaagctatcgctaggcgatctggtgaacgagggcttgatccagtac
gttccttttcctgacgatctcaaaggacgttaccagagctacacccaggcagacatgagt
gccttgagggcaagcggatacacagcagaattcaaaagcgtacagtcaggtgttgcggac
tacattcggtaccaggtcagcaatggacatctgatgctcgattctgcagcatga
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