Bordetella parapertussis 12822: BPP3024
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Entry
BPP3024 CDS
T00140
Symbol
fimC
Name
(GenBank) outer membrane usher protein precursor
KO
K07347
outer membrane usher protein
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa02020
Two-component system
bpa05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BPP3024 (fimC)
09160 Human Diseases
09171 Infectious disease: bacterial
05133 Pertussis
BPP3024 (fimC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpa02000
]
BPP3024 (fimC)
02044 Secretion system [BR:
bpa02044
]
BPP3024 (fimC)
02035 Bacterial motility proteins [BR:
bpa02035
]
BPP3024 (fimC)
Transporters [BR:
bpa02000
]
Other transporters
Pores ion channels [TC:
1
]
BPP3024 (fimC)
Secretion system [BR:
bpa02044
]
Chaperone-usher system
Type 1 pilus assembly protein
BPP3024 (fimC)
Bacterial motility proteins [BR:
bpa02035
]
Pilus system
Fimbrial proteins
BPP3024 (fimC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
CAE38314
UniProt:
Q7W694
LinkDB
All DBs
Position
complement(3252250..3254871)
Genome browser
AA seq
873 aa
AA seq
DB search
MKQIPLILAMSLAFAAAAKGESAPDMQAAVNFDSAMLWGGANGADLSRFNYSNALRPGNY
IVDIYANNYPLIRQQVRFVAAQTSGQGLKTAPAVACFTYGQLEAMQVRLRALDPALVADL
KSSGRCEVLGKLFPDSRESFDFGENRLEVSIPQAYTINRFRRDISPDEWDSGITAFRLGY
QYNYADYIGGLRAGRRLDLNLYSGFNFKGWYLRNSSTLGWGQGRFTRRSQRTSLQTDIPS
WRARLVFGDVFSSGEYFAPYSMRGMLVGSDTAMLPYSERLYRPTIRGVARTRANVKVYQA
GVLVFQDAVPPGPFAIDDYSPASYGGDLRVVVTEANGAVQTFTVPYASAVRLILPGQTQW
SFSAGRYRNYRNDGQDRPWVTQLTGRHGVADGVNLYGGLLIAQAYQAGLAGLSWNTPWGA
MAADATLSRSQLSTTGNANGSSLRFSYSKTLSGTNTAIRLATLRYSSSGFWNFADAVNAG
PAETNGRNGRFGLYSLLGRERPRGDFSVTLSQPLGGYGSLYVSALRRTYWGSSRVDQQTQ
LGYSTQVGRVGVNLDVSRTENRRSTEHQVMLNLSIPLYGATSSGVVTGSLARTGSAPVQQ
SVNYSGMSGERDQYTYGLGVQRAGTSAQYALNGSWSGTYGEVSGQLTHGRSYSQYQINGS
GGLVAHAGGVTFGQYQAGTIGLIQAEAAAGAKVVNTRNAAVDRSGYGLVSLTPYSLNEVE
LSPQDLPLDVQLESTVEQVIPRAGAVVALRFPTRHDVAAMLVAEPGSEGALAFGTEVRDG
AGKVVGVAGQGASALVRGVSASGTLEVTRADGSICRATYDLKSAGQAVHGLPRIALACAP
QGGGERGARAAVQAVAQPAPISISGKDHGPDIR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagataccactgattctcgcgatgagccttgccttcgccgccgcggcgaagggc
gaatccgcgccggatatgcaggcggcggtcaacttcgactcggccatgctgtggggcggc
gccaatggcgcggatctgagccgattcaactacagcaacgcgctgcggccgggcaactac
atcgtcgacatttacgccaacaactatccgctgatccggcagcaggttcgattcgtcgcg
gcgcagacgtccgggcagggcttgaagacggcgccggcggtggcgtgtttcacctatggc
cagctggaagcgatgcaggtccggctgcgcgcgctcgatccggccttggtcgccgacctc
aaatccagcgggcgctgcgaggtgctgggcaagctgttcccggatagccgcgagtcgttc
gatttcggcgagaaccgcctggaagtcagcattccgcaggcctatacgatcaaccgcttc
cggcgcgacatctcgcccgatgagtgggatagcggcattaccgcgttccgcctgggatac
cagtacaactatgccgattacatcggcggcttgcgcgcggggcggcggctggacctgaac
ctctacagcgggttcaacttcaagggctggtatctgcgcaacagctcgacgctgggatgg
ggccagggccgcttcacgcgccgcagccagcgcaccagcctgcagacggatatcccgtcc
tggcgggcgcgcctggtgttcggcgacgtgttctccagcggcgagtacttcgcgccgtac
tcgatgcgcggcatgctggtcggcagcgataccgccatgctgccgtactcggagcggctg
taccggccgaccatacgcggcgttgcgcgcacccgggccaacgtcaaggtgtatcaggcc
ggcgtgctggttttccaggacgccgtgcctcccgggccgttcgcgatcgacgattacagt
ccggcctcgtatggcggcgacctgcgggtggtggtgaccgaggcgaatggcgcggtccag
acgttcaccgtgccgtacgccagcgcggtgcgcctgatcctgccgggccagacgcagtgg
tcgttcagcgccgggcgctatcgcaactatcgcaacgatgggcaggaccgtccctgggtg
acccagctgacgggccgccatggcgtggccgacggcgtcaacctgtacggcggcctgctg
atcgcccaggcgtaccaggccggcctggccggcctgagctggaacacgccctggggggca
atggcggcggacgccacgttgtcgcgcagccagttgtccaccacgggcaatgccaacggg
tcgagcctgaggttctcctacagcaagaccttgtccggcaccaacacggcgatccggctg
gccacgttgcgctactcgtcgagcgggttctggaatttcgccgatgcggtcaatgccggt
ccggccgagacgaacgggcgcaacgggcggttcggactttattcgctgctgggccgcgag
cggccgcgcggcgatttcagcgtcacgctgagccaaccgctgggtggatacggcagcctg
tacgtgtcggcgctgcggcggacctactggggttcgtcgcgggtcgaccagcagacccag
ctgggctattcgacccaggtcggccgcgtaggcgtgaacctggatgtctcgcgtacggag
aaccgtcgcagcaccgagcatcaggtcatgctgaatctttccattccgctttatggcgcg
acctccagcggcgtggtgacgggatcgctggcgcgtaccggttcggcgcccgtacagcaa
agcgtcaactacagcggcatgtcgggcgagcgcgaccagtacacctatggcctgggcgtg
cagcgcgccggcacgagcgcgcagtacgcgttgaacggctcctggtcaggcacgtacggg
gaggtaagcggacaactcacccatgggcgcagctacagccagtaccagatcaatggcagc
ggcggcttggtggcgcacgcgggcggcgtgaccttcggccagtaccaggcgggcaccatc
ggcctgatccaggccgaggcggcggcaggcgcaaaggtcgtcaatacgcgcaacgccgcc
gtggaccgcagcggctatgggctggtgtcgctgacgccgtattccctcaacgaggtcgaa
ctgtctccgcaggacctgcccctggacgtccagctggagtccacggtggagcaagtcatc
ccgcgggcgggcgccgtcgtggcgttgcgctttccgacgcgtcacgacgtcgccgccatg
ctggttgccgaacccggcagcgaaggcgcgctggcattcggcaccgaagtgcgcgacggc
gccggcaaggtggtgggcgtggccggccagggcgcaagcgcgctcgtcagaggcgtgtcg
gcatcgggcacgctggaggtgacgcgcgcagacgggtcgatatgtcgcgccacgtacgac
ttgaaatcggccgggcaggccgtgcacggcctgccgcgcattgcgctggcgtgcgcgccg
caaggcggcggcgaacgtggtgcgcgggcggcggtccaggccgtggcgcagccggcacct
atctccatttcgggcaaagatcatgggccagatattcgctga
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