Bacillus pacificus: LMD38_03995
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Entry
LMD38_03995 CDS
T07947
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMD38_03995 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_03995 (mutM)
Enzymes [BR:
bpac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LMD38_03995 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMD38_03995 (mutM)
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMD38_03995 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UEP95549
LinkDB
All DBs
Position
761367..762197
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAKIFKEMLKGETIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREASSLTAEEIERIYEATVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaacgtcagacggacacttgaaaatcttgtaacagga
aaaacaattgaagatgtcattgttacctatcccaaaatagtaaaacgtccagatgatgca
aaaatctttaaagaaatgctaaaaggcgagacgattgaaaatataaagcgaagaggaaaa
tttttgcttttatatgtaacgaattatgtcattgtttcacatttgcgtatggaaggtaaa
tttttactgcatcaagaggatgagccaattgataagcatacgcacgtccgtttcttattt
acagatggaactgaattacattataaagatgtgagaaagttcggtacgatgcatctcttt
aaaaaaggtgaggaaatgaatcaaatgcctcttgctgacttaggtccagagccatttgat
gctgaattgacaccacagtatttacaagagagattgcaaaagacaaatcgtaaaataaaa
gttgtattattagaccagcgtcttttagtagggcttggaaatatatatgtagatgaagtt
ttattccgttctcaaattcatccagaacgagaagcgtcgtctttaacagcagaagaaatt
gagcggatttatgaggcgactgttacaacgttaggcgaagcggtgaaacgtggcggaagt
acaattcgaacgtatattaactcacaagggcaaattggctcattccaagaacttctaaat
gtatatggaaaaaaaggagaaccgtgtgtgacttgcggtacgatattagaaaaaacagtt
gttggcggaagaggaacgcattactgcccgatttgtcagccaagaatatag
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