Bacillus pacificus: LMD38_14040
Help
Entry
LMD38_14040 CDS
T07947
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bpac
Bacillus pacificus
Pathway
bpac00470
D-Amino acid metabolism
bpac00550
Peptidoglycan biosynthesis
bpac01100
Metabolic pathways
bpac01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMD38_14040 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LMD38_14040 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LMD38_14040 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpac01011
]
LMD38_14040 (ddlB)
Enzymes [BR:
bpac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LMD38_14040 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bpac01011
]
Precursor biosynthesis
Amino acid ligase
LMD38_14040 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
GARS_A
RimK
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
UEP92516
LinkDB
All DBs
Position
complement(2665011..2665925)
Genome browser
AA seq
304 aa
AA seq
DB search
MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLAL
HGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMED
LNVDELDKLGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEWDSEVVIEKYIKGDEI
TCSIFDGKQLPIISIRHAAEFFDYNAKYDDISTIEEVIELPAELKERVNKASLACYKALK
CSVYARVDMMVKDGIPYVMEINTLPGMTQASLLPKSAAAAGIEYSKLLDMIIETSLRVRK
DEGF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagaattggcgttattatgggaggagtatcctctgaaaaacaagtatccattatgact
ggaaatgaaatgattgcaaatttagataaaaataaatatgaaattgtaccaattacatta
aatgaaaaaatggatttaatcgaaaaagcgaaagacattgattttgcattgctcgcatta
cacggaaaatacggagaagatggaactgttcaaggaacgcttgaaagtttaggtattcct
tatagcggaagcaatatgttatctagcggtatatgtatggacaaaaatatttcgaaaaag
attttacgttatgaaggaatagaaacaccagattggattgaacttacaaaaatggaggat
ctaaatgttgatgaattagataaattaggatttccgttagtggtaaaaccaaactctggt
ggctcgagtgtgggggtaaagattgtctatgataaagatgaattaatttcaatgctggaa
acggtgttcgaatgggattcagaagtagtaatagagaaatatataaaaggtgacgagatt
acatgttccatttttgatggaaaacaattacctattatttcaattcgacatgcggcggag
ttctttgattacaatgcgaaatatgatgatattagtacaattgaagaagttattgaactt
ccagctgaacttaaggaacgtgtaaacaaagcgtcactggcttgctataaagcattaaaa
tgcagcgtttatgcaagggtggatatgatggtgaaggatggtattccatatgtaatggag
attaatacattaccagggatgacgcaagcgagtttactaccaaaaagtgcagctgcagcg
ggaattgaatatagtaaactattagatatgattattgaaacttcattaagagtaagaaaa
gacgaaggattttaa
DBGET
integrated database retrieval system
