Bradyrhizobium pachyrhizi: QA639_39970
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Entry
QA639_39970 CDS
T09303
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah00470
D-Amino acid metabolism
bpah00550
Peptidoglycan biosynthesis
bpah01100
Metabolic pathways
bpah01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QA639_39970
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QA639_39970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
QA639_39970
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpah01011
]
QA639_39970
Enzymes [BR:
bpah01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
QA639_39970
Peptidoglycan biosynthesis and degradation proteins [BR:
bpah01011
]
Precursor biosynthesis
Amino acid ligase
QA639_39970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
CPSase_L_D2
B12-binding
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
WFU55650
LinkDB
All DBs
Position
complement(8452717..8453751)
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AA seq
344 aa
AA seq
DB search
MKQLRILVLMHPDCVPPDSSDGYSAREINEWKTEYDVVSTLRAAGHEVRPLGVQEEIKPV
RDEIEGFKPHVVFTLLEEFHYDVVYDQHIASYLELMKIAYTGCNPRGLILARGKDLSKTL
VHHRRIPVPAFAVFPMRRKVKRPPRLELPLIVKSLSSDGSLGISQASIVDTDEKLAERVA
FIHERIGTAAIAEQFIEGRELYVGVLGNNRLRVLPVWELKFGSMGGPAARQIATEKVKHD
TSYQERVGIVDGPAEDLTPELSAHIQRLAKRIYRTLGLDGYARIDFRLSTNGVPYFIEAN
PNPEIAKSQEFATAAGHDGLDYPDLLQRIVTLGISRAKAGASLG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcttcgcattctggtgctgatgcacccggactgtgtgccgcccgactccagc
gatggatacagcgcgcgggagatcaacgagtggaagacggaatacgacgtcgtgagcacc
ctgcgcgcggccggccatgaggttcgtccgctcggcgtgcaggaggaaatcaagccggtg
cgcgacgagatcgagggcttcaagccgcacgtcgtgttcacgctgctggaggagtttcac
tacgacgtcgtgtacgaccagcacatcgcgagctatctcgagctgatgaagatcgcctat
accgggtgcaatccgcgcggcctgatcctggcacgcggcaaggatctgtccaagacgctg
gtgcaccatcgccggattccggtgccggccttcgcggtgtttccgatgcgccgcaaggtc
aagcggccgccgcgtctcgagctgccgctgatcgtcaagagtctgagcagcgacggatcg
ctcggtatctcgcaggcgtcgatcgtcgataccgacgagaagctcgccgagcgcgtcgcc
ttcatccatgagcggatcggaacggccgcgatcgccgagcagttcatcgagggacgcgag
ctctatgtcggtgtgctcggcaacaaccggctgcgggtgctgccggtgtgggaactgaaa
ttcggcagcatgggtggccccgctgcgcgccagatcgccaccgaaaaggtcaagcacgat
accagctatcaggaacgcgtcgggatcgtcgacggcccggccgaggatctcacgccggaa
ctatccgcccatattcaacggctggcgaagcgcatctaccggaccctggggctcgatggc
tatgcgcgcatcgacttccgcctgtcgaccaatggcgttccctatttcatcgaggccaat
cccaaccccgaaatcgccaagagccaggagttcgcgacggccgccgggcatgacgggctg
gactatccggatctcttgcagcgcatcgtgacgctcggaataagccgcgccaaggccggc
gcatcgctgggctga
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