KEGG   Bordetella parapertussis Bpp5: BN117_4200
Entry
BN117_4200        CDS       T02297                                 
Symbol
rep
Name
(RefSeq) ATP-dependent DNA helicase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
bpar  Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpar03400]
    BN117_4200 (rep)
Enzymes [BR:bpar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BN117_4200 (rep)
DNA repair and recombination proteins [BR:bpar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BN117_4200 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 DEAD
Other DBs
NCBI-GeneID: 13892237
NCBI-ProteinID: YP_006897930
UniProt: K0MB57
LinkDB
Position
complement(4510202..4512271)
AA seq 689 aa
MSASDTSIGSGLNPSQKEAVLYLDGPCLVLAGAGSGKTRVITQKMAYLLRECGYMGRNIV
ALTFTNKAAREMAERVKTLVDPKLAKGLTISTFHALGVRLLREEAAHAGLKPQFSILDAD
DAMSIIQELLATTDRGRLREVQSIISLWKNALLTPDQAAAAAITPTEVEAVTVYRGYAAT
LAAYQAVDFDDLIRIPAELLERNEEVRTRWQNRVRYLLVDEYQDTNVCQYRLVQLLTGVR
AMFTAVGDDDQAIYAWRGATIENLAKLTTDYPNLKLIKLEQNYRSVQRILAAANNVIERN
PKLFEKKLWSDLGHGEPIIVSPMNGDEHEAESIAMKVSAARFERQAQWKDFAILYRSNHQ
SRVLEQALRNLKIPYTISGGQSFFDKAEVRDILAYLRLVANDEDDPAFIRAATTPKRGIG
QGTLQTLGQYAAQRQCSLLAAVDEAGLESLLAPRQLEPLRTFAEFVRRIQWRAGRGVEGQ
PARAPEPAGQILDDLLSAIQYERYLYDMLEERPAQTRWQNVLELTGWLKRKAEEDGMTLF
DLVQHVALVTMLERGEEEEPDAVKLSTLHASKGLEYPHVYLAGVEEGLLPHLGKDDEDSG
DPARAAETLATRIQEERRLMYVGITRAQRSLNLSWCKKRRRAREDVVREPSRFIEEMGLG
DAKVQEDEATRAMSPKERLGMLKALLKKD
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgtccgcaagcgatacctcgataggcagtggcttgaatccctcccagaaagaagccgtg
ctgtacctggacgggccgtgcctggtgctggccggcgcgggcagcggcaagacgcgcgtc
atcacgcagaagatggcctatctgttgcgcgagtgcggctacatgggccgcaacatcgtg
gcgctgaccttcaccaacaaggccgcgcgcgaaatggccgagcgcgtcaagaccctggtc
gatccgaagctggccaaggggctgaccatcagcaccttccatgcgctgggcgtgcggctg
ctgcgcgaagaggccgcgcatgccggcctcaagccccagttctccatcctggacgccgat
gacgccatgagcatcatccaggagttgctggcgaccaccgaccgcggccggctgcgcgag
gtgcagtccatcatctcgctgtggaagaacgccctgctcacgccggaccaggcggcggcc
gccgccatcacgcccaccgaagtcgaggccgtgaccgtctaccgcggctacgcggcgacg
ctggcggcataccaggcggtggatttcgacgacctgatccgcattcccgccgaactgctc
gagcgcaacgaagaggtgcgcacgcgctggcagaaccgggtgcgctatctgctcgtggac
gaataccaggacaccaacgtttgccagtaccgcctggtgcagctgcttaccggtgtacgg
gccatgttcacggcagtgggcgacgacgaccaggccatctacgcgtggcgcggcgccacc
atcgagaacctggccaagctgaccaccgactatcccaatctcaagctgatcaagctggag
cagaactaccgctcggtgcagcgcatcctggccgccgccaacaacgtgatcgaacgcaac
cccaagctgttcgagaagaagctgtggtcggacctgggtcatggcgagcccatcatcgtc
tcgccgatgaatggcgacgagcacgaggccgagtccatcgcgatgaaagtgtcggcggcg
cgcttcgaacgccaggcgcaatggaaagatttcgccattctttatcgtagcaatcatcaa
tcgcgcgtgctggagcaggcgctgcgcaacctcaagattccgtacaccatctcgggcggc
cagagcttcttcgacaaggccgaggtgcgcgacatcctggcctacctgcgcctggtcgcc
aacgacgaggacgaccctgccttcatccgtgccgcgaccacgcccaagcgcggcatcggc
cagggcaccctgcagacgctgggccaatacgccgcgcaacgccaatgctcgctgctggcc
gcggtggacgaggccgggctcgagagcctgctggcgccgcgccagctggagccgctgcgc
accttcgccgagttcgtgcggcgcattcagtggcgcgccggacggggcgtcgaaggccag
cccgcgcgcgcgccggagccggccggccagatcctcgatgacctgctctcggccatccag
tacgaacgctacctgtacgacatgctggaagagcggccggcgcagacgcgctggcagaac
gtgctggagctgacgggctggctcaagcgcaaggccgaggaggacggcatgacgttgttc
gacctggtgcagcacgtcgcgctggtgaccatgctcgagcgcggcgaggaagaagagccg
gacgcggtcaagctgtccaccctgcacgcgtccaaggggctggagtacccgcacgtctac
ctggctggcgtcgaggaaggcctgctgccgcacctgggcaaggacgacgaggacagcggc
gaccccgcgcgcgccgccgagaccctggccacgcgcatccaggaagaacgccggctgatg
tacgtgggcatcacgcgagcgcagcgcagcctgaacctgagctggtgcaagaagcgccgc
cgcgcgcgcgaagacgtggtgcgcgagccttcgcgcttcatcgaggagatgggcctgggc
gacgccaaagtgcaggaagacgaagccacgcgcgccatgagccccaaggagcgcctgggc
atgctgaaggcgctgctgaagaaggactag

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