Burkholderia pseudomallei 668: BURPS668_2280
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Entry
BURPS668_2280 CDS
T00481
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bpd
Burkholderia pseudomallei 668
Pathway
bpd03030
DNA replication
bpd03430
Mismatch repair
bpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BURPS668_2280 (holB)
03430 Mismatch repair
BURPS668_2280 (holB)
03440 Homologous recombination
BURPS668_2280 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpd03032
]
BURPS668_2280 (holB)
03400 DNA repair and recombination proteins [BR:
bpd03400
]
BURPS668_2280 (holB)
Enzymes [BR:
bpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BURPS668_2280 (holB)
DNA replication proteins [BR:
bpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BURPS668_2280 (holB)
DNA repair and recombination proteins [BR:
bpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BURPS668_2280 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
DNApol3-delta_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABN81920
LinkDB
All DBs
Position
I:complement(2261615..2262649)
Genome browser
AA seq
344 aa
AA seq
DB search
MIYPWQTDDWNRLQALRAHWPHALLLYGQAGIGKLAFARHLAKGFLCETPRENGEPCGAC
AACTWFEQGNHPDYRIVVPEALAAELPGAADEPKAADADEGGKKARTPSKEIKIEQVRAL
VDFCGIASHRGGARVVVLYPAEALNVAAANALLKTLEEPPSGVVFLLASARVDRLLPTIV
SRCRQWPMAVPAPDAAAAWLAAQQVADANALLAEAGGAPLAALALANDENRPLRDWTLVQ
LAAGAACDPFACGETLQKLPVPVVLGWLQRWLYDLLAEHAAGAPRYFPAQRAALARCAAA
ADANAFARFLRTVTRQRAVENHPLSARLVFEELFLGYRELFASP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccgtggcagaccgacgactggaaccgcctgcaggcgctgcgcgcgcattgg
ccgcacgcgctgctgctgtacgggcaggcgggaatcggcaagctcgccttcgcgcggcac
ctcgcgaagggcttcttgtgcgagacgccgcgcgagaacggcgaaccgtgcggcgcgtgc
gccgcgtgcacgtggttcgagcagggcaatcaccccgattaccggatcgtcgtgcccgag
gcgctcgcggccgagctgccgggcgcggccgacgagccgaaggccgccgacgccgacgaa
ggcggcaagaaggccaggacgccgagcaaggaaatcaagatcgagcaggtgcgcgcgctc
gtcgacttctgcgggatcgcgtcgcatcgcggcggcgcgcgcgtcgtcgtgctgtatccg
gccgaggcgctgaacgtcgcggccgcgaacgcgctattgaagacgctcgaggagccgccg
tcgggcgtcgtgttcctgctcgcgtccgcgcgcgtcgaccggctgctgccgacgatcgtg
agccgctgccggcagtggccgatggcggtgcccgcgcccgacgcggccgccgcgtggctc
gcggcgcagcaggtggcggacgcgaacgcgctcctcgccgaggcggggggcgcgccgctc
gccgcgctcgcgctcgcgaacgacgagaaccggccgctgcgcgactggacgctcgtgcag
ctcgcggcgggcgccgcgtgcgatccgttcgcgtgcggcgagacgctgcagaaactgccc
gtgcccgtcgtgctcggctggctgcagcgctggctgtacgatctgctcgccgagcacgcg
gcgggcgcgccgcgctatttccccgcgcagcgcgcggcgctcgcgcgctgcgcggcggcg
gccgacgcgaacgcgttcgcgcgcttcctgaggacggtcacgcggcagcgcgcggtggag
aaccatccgctcagcgcgcgcctcgtgttcgaagagctgtttctcggctatcgggaactg
ttcgcgtcgccctga
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