Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156823
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Entry
110156823 CDS
T05002
Symbol
vps8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110156823 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110156823 (vps8)
Membrane trafficking [BR:
bpec04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110156823 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps8
Clathrin
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3H2C3
ANAPC4_WD40
HOIP-UBA
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110156823
NCBI-ProteinID:
XP_020776710
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
MSEGADSALSVAQLKDMDVDAIDDKEFDIPQVDTPPTLESILSELEEEDIPFVLEDTCLL
NTDNMDAHSCDTSSLASSDSGDPANLKRRKKTLDVNASVHGSVLRHSLLKGISAQIVSAA
DKVDAGLPTAITVAGVIAVGTSHGLALVFDSNQALRLCLGSKSTGAEFGAVSALSINHDC
TRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGGSVFEL
AFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRTPPDFRDHPITQYSLLAMASLTKILMIGL
KPTLKVYVLSVCLQSDPSSVPQLAWQFVPVQKIVNPILAFCKGDTVHFLLVKKEETGTIH
VIKQKQLQLTCDLISLSWINSRTLVLVDSHEKLQVVDKPSQEVLEIMDLEQVQLVYNSRH
FKSLATGGNVSQALALVGEKACYQSVSSYAGQIIYLGTKSAHMMTLRSWRERIDCLLKQD
SFVEALSLAWSFHEGTAKAVVGLCGDPVKRKGVVGDKMVEILLQFTEHALKKCPEQGKIQ
VMEQHFHDIVPVLVDYCLLLQRLDLLFNQLYSRLLENVVAKGVFLEVLESYIVADRLGHL
TTPIMRDLLAHYHGNGMMDSLERCIVHLDVTSLDIQQVVNVCWDNKLYDAMMYVFNSGMN
DYITPLEKLFSVIGPPLREGRSLTDEEVIMGNKVLVYISCCLAGRAYPLGDIPEDLVTQV
KNQVFDFLIRLHSADSTEEEDVFPFIRTLLHFDTREFLNVLAMTFEDFKNDKQALEYQQR
IVDILLQVMVDNPDFTPSQVGCLFTFLARQLAKPDNTLFVNRNLFDQVLEFLCSPVDDSR
HTERQQVLLELLQVGGVVQFDEEGLLTLAEKAKFFQVCEFLYEKKHLYDRIIDCYLNDPL
RKEEIFSYVHNLLSMPGYSVEEKQAVRDKALLHIKELVCLDAQKSSDLVLFHFSEEVQSI
LSVLQEAQLQFNLLSCLLGPSLTQDLSLHELLLELMCRFAPEQLLDFLQSCQQYRLEEAI
QITDKYHHNEATAYLLEKKGDVHGAFNILLEMLKEKLTVLTASQTEGSLEEESAHKDLEQ
ALNTVIELCHRSSQGLNQQQTEGLWFPLLEAMMASQKNMTGANSKHTSEVLKELTMKVLN
SMSSFISLPAIIQRILQDPVYGKGKLAEIQGLILGMLDTFNYEQVQTHFRVYSXVXDLDW
NXAHLHSAVKRGLHPRQDSCIICLQQYKRKQDSTEEIIVFSCGHLYHLQCLQQKDCSLGQ
FPKNKVWSCYKCSSSQGGRTVPPSQPKRGRTASLAQTRVTSVYHDSDSERKKFFVEATLD
HHQEQSWDQLRSLYRGPSRLSILSELTQSSEKPGLLMSAQTGVDFQLKLSPPPLVEE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggtgcggatagtgcgctctctgtggctcaactaaaagacatggacgtggac
gcgattgatgataaggaatttgacattcctcaggtggacacccctcccactctggagagc
atcctcagtgagcttgaggaggaggacattccctttgtgctggaggacacctgtttgtta
aacactgacaacatggatgctcattcttgtgacacctcatctttggccagctcggacagt
ggagacccagccaatctcaaacggaggaagaaaacactggatgtgaatgcctcagtacat
ggttctgttctgagacacagtttgctcaaaggcatctcggcacagattgtctcagctgct
gacaaagttgatgccggtctgccaactgccataacagtggcgggtgtcatcgctgttgga
acatcacatggtcttgcgctggtgtttgacagtaaccaggctctccgtttgtgcctgggg
tccaagagcactggagctgaatttggagccgtctctgctctgagcatcaaccacgattgc
acccggctgctctgtgggttcgccaagggacagataactatgtgggacctggccaatggt
aaactgctgagaactatcactgatgcccaccctccaggaactgccattctgcatgtgaag
ttcacagatgacccaactctggcagtttgcaacgacagtggaggctctgtgtttgagtta
gcattcaggagggtgatgggcatgcgctcatgtgactccagatgcctcttcagtggctct
aaaggagaggtgtgctgcattgaacccctccggacccctccggacttcagagatcacccc
atcactcagtactcactgttggccatggcctctctcaccaagatcttgatgatcggatta
aaaccaaccctcaaagtgtatgttttgtctgtctgtttgcagtctgacccctctagtgtc
cctcagcttgcctggcagtttgttcctgttcagaagatcgtcaaccccatcctggccttc
tgtaaaggagatacagttcatttcctattggttaagaaggaggagacgggcaccatccat
gtcatcaaacagaagcaactgcagctcacatgtgacctcatcagcctcagttggataaac
agccgtacccttgttctggtggacagccacgagaagctgcaggtggtggataaacccagt
caggaggtcctggagattatggacctggagcaggttcagctggtctacaacagccgacac
ttcaagtctctggccacaggggggaatgtgtcccaggctctggctctggtcggtgaaaag
gcctgttaccagtctgtgtcaagttatgccggccagatcatttatttaggcaccaagtct
gctcacatgatgactctaagaagctggagagagcggatagactgcttgctgaagcaggac
agtttcgtggaggccctctctttggcctggtcttttcacgagggcacagctaaagctgta
gttggtctctgtggagatccagtgaaacggaaaggagttgtgggtgataagatggtggag
atccttttgcaattcacggagcatgctctgaagaagtgtccagagcaaggaaaaattcaa
gtgatggagcagcacttccacgacattgttcctgtcctggtggattactgcctgctgcta
caaagattggatttgctgtttaatcagctctacagccgactgctggaaaatgttgtggca
aagggcgtattcctcgaagtattggagtcctacattgtggcagatcgcttgggtcatctg
accacacctattatgagggacctccttgcccattaccatggcaacggcatgatggatagc
ctcgagaggtgcattgtgcatctggatgtgaccagcctggacattcagcaggtggtgaac
gtctgttgggataataaactgtatgatgccatgatgtatgtcttcaacagtggcatgaat
gactacatcacacctttagaaaaacttttttcagtgattggtcctcctcttagagagggg
cgaagtctgacagatgaagaagtgataatggggaataaggtcctagtttacataagttgc
tgtctggctgggagagcgtatcctcttggagacatccctgaagacctggtgacgcaggtc
aagaaccaggtctttgacttcctgatccgactgcactcggctgactccacagaggaagag
gatgtgttcccatttattcgcactctgcttcactttgatacccgcgagttcctcaatgtc
ttggctatgacgtttgaagactttaagaatgacaaacaggcactagagtaccagcagaga
atagttgacatcctacttcaggtgatggtggataaccctgacttcactccgtctcaggtt
ggctgtctcttcaccttcttggctcggcagctggccaaaccagacaacacactgtttgtc
aaccgaaatctatttgatcaggtgttggagttcctgtgcagtccagtggatgactctaga
catactgaaaggcagcaggtgctgctagaactgctacaggtgggcggtgtggtgcagttt
gatgaagaaggactactgacgttagctgaaaaggccaagttcttccaggtttgtgagttt
ttgtatgagaagaaacacctgtatgacagaatcatagactgctacttgaatgaccccctg
cggaaggaggaaatcttcagctatgtgcacaacctgctgtctatgccaggttatagtgtc
gaagagaagcaggctgtgagggacaaggctctgctgcacatcaaggaactggtgtgcctg
gatgcacagaaatcctcagacctggttctctttcacttttctgaggaggtgcagtcgatt
ctgtccgtgctacaggaggcccagcttcagtttaacctccttagctgtctcctgggacca
agtcttacccaggatctatcactccacgagctcttgttggagctaatgtgccgctttgcc
cctgagcagctgctggatttcctgcagagctgtcagcagtacagactggaggaggccatt
cagataactgacaagtaccaccacaatgaggcgactgcctacctgctggagaagaagggt
gatgtccatggagccttcaacatccttttagagatgctgaaagagaagctgacagtgttg
acagccagtcagactgaaggaagtcttgaggaggagtctgctcacaaagacctggagcag
gctttgaacactgttattgagttgtgtcaccggagctcccaaggtctaaatcaacaacaa
actgagggtttgtggttccctcttcttgaggccatgatggcttcacaaaaaaatatgaca
ggtgcaaacagcaagcacacctctgaagttctcaaggagctgacaatgaaagttctgaac
agcatgagcagtttcatctctctgccagcaatcatccagagaatactacaggatcctgtt
tatggaaagggaaagctggcagaaatccagggtcttatcctgggcatgcttgacacattc
aactatgaacaggtacagacccattttagagtttacagttaggtgtgagatttggactgg
aatnnngctcacctacactctgcagtgaaacgagggctccacccccgacaggacagctgc
attatctgtttgcagcagtacaagaggaaacaggacagcacagaggagatcattgttttc
agctgtggacacttgtaccacctccagtgcctgcagcagaaggactgtagtttggggcag
ttccctaaaaacaaagtgtggagctgctacaaatgttcatctagtcaggggggtcgcact
gtgccccccagccagcccaagagaggccgcacggcctccttggcacagacacgagtgaca
tccgtctaccatgactcagattctgagagaaagaagttttttgttgaagccacattagac
catcatcaggaacagtcctgggaccagctgcgcagtttgtatcgagggccttcacggctg
tccattctatcagaactgacacagagttcagagaagcctgggctcctcatgtctgcacag
acaggagttgacttccaactcaaactgtcaccgccccctctagtggaggaataa
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integrated database retrieval system
