Bordetella pertussis 18323: BN118_1294
Help
Entry
BN118_1294 CDS
T02296
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bper
Bordetella pertussis 18323
Pathway
bper00540
Lipopolysaccharide biosynthesis
bper01100
Metabolic pathways
bper01250
Biosynthesis of nucleotide sugars
Module
bper_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bper00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BN118_1294 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bper01005
]
BN118_1294 (rfaD)
Enzymes [BR:
bper01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BN118_1294 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bper01005
]
Core region
BN118_1294 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
CCJ62719
UniProt:
A0A0T7CMF6
LinkDB
All DBs
Position
1412300..1413289
Genome browser
AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIQDIIAVDDLTDGDKFRNLVDCSIADYLDKDEFRERV
RGGNLPALRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEYCQAERVPFLYASSAAVYG
GSSVYVEDPANEHPLNVYGYSKLLFDQVLRTRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLAEGHVRLFAGWDGYEDGGQSRDFISVEDVVAVNLHFLDNPDQSGVFNCG
TGRAQPFNDVAAAVVNTLRAERGEAALPLAELVKKGLLRYIPFPDDLKGRYQSYTQADVS
RLRATGFSAPMRDVQTGVSEYVRYWRVLK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtgaccggcgcggccggctttatcggcagcaatctggtgcgcggcctgaac
cggcgcggcatccaggacatcatcgccgtcgacgacctgaccgacggcgacaaattccgc
aacctcgtcgattgcagcatcgccgactatctcgacaaggacgagttccgcgaacgcgtg
cgcggcggcaacctgccggccttgcgtgccgtgctgcaccagggcgcctgctcggacacc
accgagcgcaacggccgctacatgctggacaacaactaccgcgtcacgctggaactgttc
gagtactgccaggccgagcgcgtgccgttcctgtacgcctcgtcggccgcagtctacggc
ggttcgtcggtgtatgtggaagacccggccaacgagcatccgctcaatgtgtacggctat
tccaagctgctgttcgaccaggtgctgcgcacgcgcatggacagcctgaccgcccaggtg
gtggggctgcgctatttcaacgtgtacgggccgcacgagcagcacaagggccgcatggct
tcggtggccttccacaacatgaaccagttcctggccgaaggccatgtgcgcctgttcgcc
ggctgggatggctacgaggacggcgggcagagccgcgatttcatttcggtcgaagacgtg
gtggcggtcaatctgcatttcctcgacaaccctgaccagtcgggcgttttcaactgcggc
accgggcgcgcccagccgttcaacgacgtggccgcggcggtggtcaataccctgcgcgcc
gaacgcggcgaggcggcgctgccgctggccgaactggtcaagaagggcctgctgcgctat
atcccgttcccggacgatctgaaagggcgctaccagagctacacccaggccgacgtcagc
cggctgcgggcgaccggcttcagcgcgccgatgcgcgatgtacagactggcgtatcggaa
tacgtgcgctattggcgcgtcctgaagtag
DBGET
integrated database retrieval system
