Bathycoccus prasinos: Bathy03g04540
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Entry
Bathy03g04540 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy03g04540
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bathy03g04540
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
Helicases
Bathy03g04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
ATPase
AAA_19
AAA_23
Motif
Other DBs
NCBI-GeneID:
19016991
NCBI-ProteinID:
XP_007514229
UniProt:
K8ECH0
LinkDB
All DBs
Position
3:852594..856499
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AA seq
1301 aa
AA seq
DB search
MATGGGRERDVEKKTKKKKTKKTKKHKEEDEEETMLSEELSGTVVLLHAKKKKSTTSKEP
PPLPEKKLSKSQKRKLLKVEEDKRKRAGREAVLESLKKNTLKEEEMYYFEKSSTLGNKET
RKEKLTKQMKAERMGISSYLPGQREEQERLAKRAKTANEKDAAESSEEEEDEAREEDRAK
AKEEEEPSKELTEQEKVDLEALGDVDIIERSKIGVQTLDGATRALVSALREKYKLKEDAA
DELALQPQQKSEYHEVFFGSAYAVPVERDEKIQEGRLQLPILGEEHEIMNAINTNPISVI
CGQTGCGKTTQVPQFLYEAGYGDPGCVDHPGAVCVTQPRRVAVTSTAKRIAEELNVKLGG
DVGYQVRHDKRVGDTPRIKFCTDGILLREIQADLLLRKYSVVIVDEAHERSVNTDILLGL
LSRIVPLRAALTKEKNNKNVITPLRLVVMSATLRVEEFVKNKKLCPIPPVVMNVAARQFP
VTIHFSRRTEMVDYVSEALRKTLAIHRKLPPGDVLVFLTGQKEVEDFCKRLRGNYPLKKK
VKKKKKQTAHRITSEQGDEDNDNQDDDDGEEEEEEEEEEEEEEEEEEEEDDAIGDAYDVD
AADAAGEVLNDFNEDTFKDDFDDDDDDRSDISEEDEVVVMGDALTEEETKIAEADWARKY
APTANFKVITDDNTDGKKKEEGGTDESNNRENDDDGPGPLNVLPLYAMLPPQAQARVFAK
TPKGYKRNVIVSTNVAETSLTIPGVRYVVDAGRQKERKYEKTSGMSRFEVGWISKASAEQ
RAGRAGRTAPGHCYRLFSSSHYVNDLNEFAAPAITTAPVDGVVLSMRYLGIDKVLNFPFI
TPPDFEQVRLATRTLEILGATNQIGELSDIGRRMAQIPVSPRQARMLIAASVSGVKNCLI
YAIAVCAGLGMDSPFLKHVEANDSEDRNDRNDDDDEEKEMKEGKKSNAPPPHVKFHHVNS
DALTVAQCLLAYNQFVEANGPSKAHVFCQENRLHERTMREMSDLRKQLFRVLSRIGLIEE
DEVAEKVSVSKIVIKPNSDLDKALRKALCCGWIDQVARRSKQKELEQYARDAEIRGENLD
SMSRSTKALRYKPAFDSSSNGGLDDNRPVFLHPSSALHKTASEFIVYNDLIQTQKRPYVV
GATTVEPSWLLQSECLLEGMDRVLDDPIPRYAPNRDQVVCWVAPRFGPHLWELPLKAMNV
TELEKAVGPFATALLLGNVFQCFAEIKDKYAAKPILCSRIEGRSQPRVQNLLYELKKKGV
CTKEKLARELARNRDYLRKEISAWLKAGKQHTLDNIWGRWK
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggctactggaggaggaagagaaagagacgtcgagaagaagacaaagaagaagaagaca
aagaagacaaagaagcacaaagaagaagacgaagaagaaacgatgctttcggaggaactt
tccggaactgtcgtgttactccacgcgaagaagaagaagtcgacgacatccaaagaacct
ccacctcttccggaaaagaaactctcgaaatcgcaaaagcggaaacttttgaaggtggaa
gaggacaagaggaaacgcgcgggaagggaagccgtgctcgagtcgttgaagaaaaacact
ctcaaagaggaggagatgtattactttgagaagtcctcgacgcttggaaacaaagagacg
aggaaagagaaactgacgaaacaaatgaaagcagagcgaatggggatatcgagttattta
cccgggcagagagaagagcaggagagattggcgaaacgggcgaaaactgccaacgagaaa
gacgcggcggagtcttccgaggaagaggaggacgaggcgcgagaggaagaccgcgcaaaa
gcgaaggaagaagaagagccatcgaaggagttaactgaacaagaaaaggtagatttagaa
gcactaggtgatgtggacatcatcgaacggtctaagattggcgtacaaacgctcgatgga
gccacgcgagcgttagtttcagctttgagagaaaaatacaagctgaaagaagacgccgcc
gacgaacttgcactgcaaccgcagcagaaatcagaatatcacgaagtcttcttcggcagc
gcgtacgccgttcccgtagaaagagatgaaaaaatacaagaaggacgccttcagttgccc
attttaggcgaagagcacgagattatgaacgcgattaatacaaatccaataagtgtgatt
tgcggacaaaccggatgcggtaaaacgacacaggttccgcaattcctatacgaagccggg
tatggagatccaggttgtgtggaccatccgggagccgtatgcgtgacacaaccgagacga
gtagccgtgacgtcgacagcgaaaagaatagccgaagaattgaacgtgaaattaggaggt
gatgtcgggtaccaagtccgtcacgataaacgcgtcggcgatacgcctcggattaaattc
tgtaccgatggtattttacttcgagaaattcaagcagatttgttgttgcgcaagtattca
gtcgtcatagtcgacgaagcgcacgagagatcggtaaacacggatattttgctgggttta
ctgtcgagaattgtgcctttacgggcggctctgacgaaagagaagaataataaaaacgtc
atcacgcctttacgtcttgtcgtcatgtctgcgactctgcgcgtcgaagagtttgtgaag
aataaaaaattgtgtccaataccaccggttgttatgaacgttgcggcgagacagtttccc
gtgacgatacatttctcgcgaagaacggaaatggtagattacgtctccgaagcgttgcgt
aaaacgctcgcgattcaccgcaaactacctccgggagatgttctcgtgtttttgaccggt
cagaaagaagtcgaagacttttgcaaacggttaagagggaattatcccttgaagaaaaaa
gtaaagaagaagaagaaacagacggcacataggataacgtcggagcaaggagacgaggac
aacgacaatcaggatgatgatgatggtgaagaggaagaggaagaggaagaggaagaagaa
gaagaagaagaagaggaggaagaagaggacgatgcgataggtgatgcgtatgatgtagat
gccgccgatgctgctggagaagttttgaatgatttcaacgaagacacgttcaaagatgac
tttgacgacgacgacgatgaccgctcagatatttccgaggaagatgaagttgtcgtaatg
ggcgacgcgctgaccgaagaagagacaaaaatagccgaggcagattgggcacgaaaatac
gcaccgactgccaacttcaaagtcatcactgatgataataccgatggcaaaaagaaagaa
gaaggaggtactgatgagagtaacaatcgtgaaaatgacgatgatggtcctgggccgttg
aacgttttacctttgtatgccatgcttccgcctcaagcgcaagcgcgcgtgtttgcgaaa
acaccaaaagggtataaaagaaacgtcatagtatccacaaacgtagccgaaacatcgctt
acaatccctggagttcgatatgtcgtcgatgctggacgtcaaaaggagagaaagtacgaa
aaaacttctggcatgtctcgattcgaagttggatggatttcaaaagcatcggctgaacag
cgcgctggtcgtgctggaagaactgcgcctggacactgctatcgcctgttttcgtcttcg
cactacgtaaacgatttgaacgagtttgctgccccggcaataacgactgcaccggtcgat
ggagtcgttttgagcatgcgctatttaggcatcgacaaagtgttgaatttcccattcatc
acgccgccggatttcgagcaagttcgactggctacgcgtactctggaaattctaggagca
actaaccaaataggcgagctttcggatattggtcgaagaatggcacaaattccagtcagt
ccgagacaagcaagaatgctaatagccgcttctgtatcgggcgtaaaaaactgtttgatt
tacgcgatagcggtgtgcgccggtctcggtatggattcaccgtttttaaaacacgtcgaa
gcaaacgatagcgaagatagaaacgatagaaacgacgacgacgacgaagaaaaggagatg
aaagaagggaaaaaatcgaacgcgccgccgccgcacgtcaagtttcatcacgtgaactca
gacgccttgacagttgcgcagtgcttgttggcgtacaaccagtttgtagaggcaaatggt
ccatcgaaagcgcacgtgttttgccaagaaaatcgtttgcatgaacgcactatgcgtgaa
atgtcagatttacgcaaacagttgttccgggtattatctcgaataggtttgattgaagag
gatgaagtcgctgagaaagtcagtgttagcaagattgttattaaaccgaattcggattta
gataaagcgctacgaaaggctttgtgttgcggatggatcgatcaagtcgctcgacgttcg
aaacagaaagagctcgaacagtatgctcgagatgcagaaatcagaggcgaaaatctggac
tcgatgtcgcgaagcacgaaagcgttgcgatacaagccggcgtttgattcttcgagcaac
ggtggtctcgatgacaacagaccagttttcttgcacccatcctccgcgttgcacaaaact
gcgtctgagttcattgtctacaacgacttaatccaaacgcagaagcgaccgtatgtggtt
ggtgcgacgacagttgaaccgagttggttgttgcaaagtgagtgtttattagaaggcatg
gatagagtattagacgacccgataccgagatacgcgccaaatcgcgatcaagtcgtgtgt
tgggtagcacctcggtttggaccgcacctttgggagttacctctgaaagcgatgaacgtg
actgaactcgagaaagcagtcggtccgtttgcgacggcgttgcttctcggaaatgtcttc
cagtgtttcgcggagatcaaagacaagtacgcggctaagccaattctgtgttcgcgaatt
gaaggtagaagtcaaccgagagttcaaaacttactgtacgagttgaagaaaaaaggcgtg
tgcacaaaggaaaagttggcgcgagagttggcgcgaaaccgcgactatttgcgcaaagaa
atcagcgcttggttgaaagccggtaaacagcacactctagataacatttgggggagatgg
aaatag
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