Bathycoccus prasinos: Bathy15g01760
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Entry
Bathy15g01760 CDS
T03089
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Bathy15g01760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy15g01760
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
Bathy15g01760
U7-dependent histone pre-mRNA processing factors
Bathy15g01760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
Motif
Other DBs
NCBI-GeneID:
19011481
NCBI-ProteinID:
XP_007508811
UniProt:
K8ENX0
LinkDB
All DBs
Position
15:complement(327590..328642)
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AA seq
350 aa
AA seq
DB search
MDARLLLFPGIKNIQNSVLIQNLPHDSTERSLQSLFSDEIGDVVDLQIPSDTKTGKPFPF
AACEFTDRALAESAVRNVNGREYKEKKVRIRLLEHAEFGRDGCPLTTTGGQGLQGDLLEG
LEGGVLRVTVVTESEKRRRELQQLDLNSYHPSVPIGLTVAKVASSLMAPAGGFSQPTDGK
GAAMDLLSKRIGDLTPTQMFDVVRELKEMAEGDPVGTRNLLSANPQLCLAAFQCQLALGM
VKVPMIAEEQQPPVGVVAPMMQQQQQQQQTPIPTPQVVNVAPPQMVVSRGAPPPPPPLVQ
QQQQQQQQPDQSQLLAQVMALTPQQIAALPPDQRMQVEQLRQIAAAQGMI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagacttcttctcttcccgggcattaaaaacatccaaaactccgtcctgata
caaaacctcccgcacgacagcaccgaacgttcgctccaatcgttattctcggacgaaatc
ggcgacgtggtcgatttacagatcccgtcggatacgaaaaccgggaaaccgttcccgttc
gcggcgtgtgaatttaccgatcgcgcgttggcggaaagtgccgtccgaaacgtaaacggg
agagaatacaaggagaaaaaagtacggatacggctgttggaacacgcggagttcgggaga
gacgggtgtcctttgacaacgactggaggacaaggattacaaggggatctgttggaagga
ttggaaggaggcgttctgagagtgaccgtagtgacggaaagcgagaaaagacgaagagag
ttacaacaactcgatttgaacagttaccacccgtccgttccgattggacttacggttgca
aaagtagcgtcgagtttaatggctccagcgggcgggtttagtcaaccgacggatgggaaa
ggcgccgcgatggacttgttgtcgaaacgaatcggcgatttgacgccgacgcaaatgttc
gacgtggtgagagagttgaaagagatggcggagggggatccggttgggacgagaaatttg
ttgagcgcgaatccgcagctgtgtttagctgcgttccagtgtcagctcgcgttagggatg
gtgaaggtgccgatgattgctgaagagcagcagcctcccgttggcgtcgtcgcgccgatg
atgcaacaacaacaacaacaacaacaaactccgattccgacaccgcaagtagtcaacgta
gcgccgccgcaaatggtggtaagtagaggcgcaccaccgccgccaccgccactggtacag
caacaacagcagcaacaacaacaaccggatcaatcgcaactcttagcccaagtcatggcg
ttgacgccgcagcaaatcgccgcgcttccgccggatcaaagaatgcaggtggagcaatta
cgacagattgccgccgcgcaaggcatgatttga
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