Bathycoccus prasinos: Bathy17g00110
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Entry
Bathy17g00110 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy17g00110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy17g00110
Spliceosome [BR:
bpg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Bathy17g00110
Complex C
U5 SnRNP specific factors
Bathy17g00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
19010923
NCBI-ProteinID:
XP_007508471
UniProt:
K8F6W0
LinkDB
All DBs
Position
17:19610..22687
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AA seq
1025 aa
AA seq
DB search
MDESNYDEFGNYIGPDVDSEDDLIEDDNNEEEDGDWGRRRRGDGADEEMRGNDEDEDEEN
DEEEPTTTNAIVVLAEDKKYYPSSKEVYGEDTETLVETEDAQALEVPIIASQNTKRFEIV
SEDSKLDISHAKMKCKPEFLEMLWQTPVLSRNVCIAGHLHHGKSSLVDALVEETHDVSDA
WKYDDNLGSSSTQLSQNNYNALRLYTDTRLDERSREMSIKAVPMTLPLADGKHGKTHSIS
IFDTPGHANFCDEVSAAARIADGFLIVVDAAEGVMCGTEKAIKIAARENVPCVLFINKID
RLIVELKLPPADAYHKLRHVIEECNALIEAAYGPENARLCTPVNNRVCFGSSLYGFSFTL
ESFAKTYKNVSQSDDLDHKQFAKRLWGDAYFDEETRAFKKKPPVGQHDCERSFVQFILEP
LYKLFSQAVGEAPESFQRALKEFNRFSYKLKPKELKQNTKPLIKLAFSKVFESHGGLTDI
LLHSIPNPIEGAESKISRTYTGELSTSGRRVRAMQTCDKDGPLAVQIVKLYPSTKSPGAF
DAFGRVLSGTLCVNDSVKVLGEAYSPDDEEDCAVKTVSHLWINEARYRIPVQSAPAGSWV
LIAGVDQSIVKTATLVSASSKDGEEGNDEDVYTFKPLEFENKAVVKIAVEPLHPSDLPKM
VEGLRKISKTYPALQTKVEESGEHIVVGMGEIYLDSAMKDLREVYADIEVKVADPVVVFA
ETVVETSALKCFAETPNKRNKITMIAEPLDKGLGLDIESKNVVLEWPKKHLANFFTQKYD
WDALAARSVWAFGPDSDGPNVLMDDTLPSEVDKDLLMSVRESIVQGFQWGTREGPLCEEP
IRETKFKILDATISSEPLQRGGGQIIPTSRRCVYSAFLTAQPRLMEPVYAVEIQTPADCM
TAIYNVLSKRRGHVVSDVAKPGTPVYIVKALLPAIESFGFETDLRAHTRGMAFGLSYFDH
WSVVPGDPLDRAIQLRPLEPSPVSHLAREFCIKTRRRKGMGEDISASKFFDSSLLEALEG
VTLYL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcgaactacgacgagttcggtaactacataggaccagacgtcgattccgag
gacgatttaatcgaggacgacaataatgaagaagaagatggcgattgggggcgacgacga
agaggtgacggcgcagacgaagaaatgagaggaaacgacgaagacgaagacgaagagaac
gacgaagaggaaccaacgacgacgaatgcaatagtagtcttagcagaagataagaaatat
tatccctcctctaaagaggtgtacggagaagatacggagacactggtagaaaccgaagac
gcgcaggctttggaggtgccgatcatcgcctcgcagaatacgaagagattcgagatcgtt
tcggaagattcaaagttggacatttcgcacgctaaaatgaaatgtaagccagaatttttg
gaaatgttgtggcaaacgccggtgttatcgaggaacgtgtgcattgctggtcatttacat
cacgggaaatcatctttagtggatgcgctcgtggaggagacgcacgacgtttcggacgcg
tggaagtacgacgataatttaggttcgagctctacgcaactgtcacaaaataattacaac
gctttgcgattatacacggacactcgacttgatgaacgcagccgcgagatgtccattaaa
gccgtgccgatgacgttacctttggcagacgggaagcacggaaagacgcactcgatttca
atcttcgatactcccggccacgcaaacttttgcgacgaagtctctgcggctgcccgaata
gccgacggattcttaatcgttgtcgatgctgcagaaggggtcatgtgtggaaccgaaaaa
gcgatcaaaattgccgcgcgagagaacgtgccgtgcgttttgttcatcaacaaaatcgac
cgactcatagtagagctcaagcttccgcctgcggacgcgtaccacaaacttagacacgtc
atcgaagaatgcaacgcgttaattgaagccgcgtatgggccagaaaatgcgcgtttgtgt
acacctgtgaataatcgcgtgtgctttggatcgagtttatacggattttcgtttacttta
gaatctttcgccaagacgtataaaaacgtttcgcagagcgatgacttggatcacaaacag
tttgcgaaacgattatggggcgacgcgtatttcgacgaagagacgcgtgcgtttaagaag
aaacctccggttggacaacatgattgcgagcgatcgttcgtgcagttcatcctcgaaccg
ttgtataagcttttctcgcaagccgtcggcgaggcgccggaatcttttcaaagagctttg
aaagaattcaacaggttttcgtacaagttgaaaccgaaagagttaaaacaaaacacgaaa
ccgctgataaaactcgcgttctcaaaagtctttgaatcgcatggcggtttgacggacatt
ttgttacactccataccgaatcccatcgaaggcgcggaaagcaagatttctcgcacgtac
acgggcgaattatcaacctcgggtagacgcgtacgagcgatgcagacctgcgataaagat
ggaccgttagccgtccaaatcgtgaaactttatccatccacgaaatctccaggcgcgttc
gacgcgtttggtcgcgttctttccggtacgctttgcgtaaacgattcggtgaaagtgttg
ggcgaggcgtattcgccggacgacgaagaagactgtgcggtgaagacagtttcgcattta
tggattaacgaagcgaggtatcgcattcctgtacagagcgcaccggctggttcctgggta
ctcatcgccggtgtcgatcaatccatcgttaaaaccgcaactttggtttctgcgtcctca
aaagatggagaagaaggaaacgacgaagacgtgtatacgttcaaaccgctggaatttgag
aataaagcggtggttaaaattgccgtagaaccgttgcatccgtccgatttaccgaaaatg
gttgaaggtttgcgcaaaatatcaaaaacatatccagcgttgcaaacaaaggtggaagaa
tccggtgagcacatcgtcgtcggtatgggcgaaatctatctggactcggcgatgaaagac
ttgcgtgaagtatacgcggacatcgaggttaaagtagcagatccggtagtggtgttcgca
gaaacggtagtcgaaacgtctgcgttaaaatgtttcgcggaaactccgaataagagaaac
aaaattacaatgattgcagaacctttggataaaggcttaggtttagatattgagagcaaa
aatgtcgtcttggagtggccgaagaaacatttggcgaactttttcacgcaaaagtacgat
tgggacgcgttagcggcgaggtcggtttgggcgttcggaccagactccgatggaccaaac
gtattaatggacgatactttaccgagtgaagtcgataaagacttgttgatgtctgtccga
gagtccatcgtccaaggtttccagtggggcacccgcgaaggtccgctttgtgaagagccg
attcgcgaaacaaagttcaaaatactcgacgcgacgataagtagcgagcctttacaaaga
ggtggtggtcaaatcattccaacctccagacgatgcgtgtactcagccttcttgaccgcg
cagcctcgtttgatggaacccgtatacgcggttgaaattcaaacgcccgcggattgcatg
acggctatttacaacgtcttgtccaaacgacgcggtcacgtcgtttcggacgttgccaaa
ccgggtacgccggtttatatcgttaaagctttacttcctgcgatagaatccttcggattt
gaaactgatttgagagcgcacacgagaggtatggcatttggtttgtcttatttcgatcac
tggtcagtcgttcccggagacccgctcgatagagccattcagttgagaccgttggaaccg
agtcctgtctcgcacttggcgagagagttttgcattaaaacgagacgacgaaaaggtatg
ggcgaagacatttcggcgtcgaagttcttcgattccagtcttctcgaagctttagaaggc
gtcactttgtatttataa
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integrated database retrieval system
