Brachyspira pilosicoli B2904: B2904_orf2343
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Entry
B2904_orf2343 CDS
T02225
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2904_orf2343 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpj03019
]
B2904_orf2343 (pnp)
03016 Transfer RNA biogenesis [BR:
bpj03016
]
B2904_orf2343 (pnp)
Enzymes [BR:
bpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B2904_orf2343 (pnp)
Messenger RNA biogenesis [BR:
bpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B2904_orf2343 (pnp)
Transfer RNA biogenesis [BR:
bpj03016
]
Prokaryotic type
tRNA degradation factors
B2904_orf2343 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
CsrA
TRAM
Motif
Other DBs
NCBI-ProteinID:
AFR71671
UniProt:
J9UKS0
LinkDB
All DBs
Position
complement(2404261..2406399)
Genome browser
AA seq
712 aa
AA seq
DB search
MVTVKSVFCGEELILETGLLAKQAHGSVTLRLGNTTILATVVAAKEPNLESDFFPLTVNY
NEKYYAGGKIPGGFFKREAKPRDKEILISRIIDRPLRPLFPEGFRNEVQIIPTVLSVDTD
MPTDALALIASSAALTISWIPFGGPVAAVRIGYKNGEYIINPKNSELASSELDIIVAGSK
DAILMIEGEAREVSEEVFIGAIELAHKEMQKYIDMQNEMAALCGTQKIEQELFEYDAELV
KMVTEYGREKIEAANYNPDKAKRNESMDNAFNEVEEYIKTKIEDEKLISQVKGICHSIEE
EIVREAIVEKGMRPDGRALDEIRPISTMTNLIPRVHGSALFTRGQTQCLSIVTLGSEKDA
QLMDDIYGKENKTFMLHYNFPPFSVGEVGRYGSPGRREIGHGNLAERSFNAVLPPKDKFP
YTIRVVAEILESNGSSSMATICASTMSLLSAGVPLNASVAGIAMGLATYKDGYKVLTDIQ
GVEDHLGDMDFKVAGTRKGITAFQLDIKLTGISTQILKEALEQAKKARYFILDKIEATIS
NPNEISDFAPKYKTMDVNPEKIRVLIGPGGKNIKAIIEETGSDVEIQDSGVINIFAPDTP
TLDKTISLINSYVKDPEVGEIYDGVVKDIKEFGAFIEILPGVEGLCHISELAYKHVMNVE
EVLKIGDEVKVKIIDVKGGKYSLSRKALLEKPADYVEEENNNKRKHDRKKRF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagttaagagtgtattttgcggagaagaattaattttagagacaggactttta
gcaaaacaagcacatggttcagtaactttaagattaggaaatactactattttagctaca
gttgttgcggcaaaagagcctaatttagaatcagactttttcccgcttactgtaaattat
aatgaaaaatattatgcaggcggtaaaattcctggaggtttcttcaaaagagaagctaaa
cctagagataaagagatacttatttctcgtataatagatagacctttaagaccgcttttc
cctgaaggttttagaaatgaggtgcaaattattcctacagtactttctgtagatactgat
atgcctacagatgctttagctttaatagcttcatctgcagcactcactatttcttggata
cctttcggaggacctgtggcagctgtaagaatagggtacaaaaatggtgaatatatcatc
aaccctaaaaacagcgaacttgcatcaagcgaattagatattatagttgctggaagtaaa
gatgctatacttatgattgaaggtgaggcaagagaggtttctgaggaagtatttatcggt
gctatagagttagctcataaagagatgcagaaatatattgatatgcaaaatgaaatggct
gctctttgcggtactcaaaaaatagaacaggaattatttgagtatgatgctgaattagta
aagatggttactgaatacggcagagaaaaaatagaagctgctaattataatcctgataaa
gctaaaagaaatgaaagtatggataatgcttttaatgaagtagaagagtatattaaaaca
aaaatagaagatgaaaaattaatatctcaagttaaaggcatttgtcattctatagaggaa
gaaattgtaagagaggctatagtagagaagggaatgcgtccagacggaagagctttagat
gagattcgccctataagcacaatgactaatcttattcctagagttcatggttctgcttta
tttactagaggacaaactcaatgtttatctatagttacattaggaagcgagaaagatgct
caattaatggacgatatatacggcaaagaaaataaaactttcatgcttcattataatttc
cctccattttctgttggagaagttggaagatacggctctcctggaagaagagaaattgga
catggtaatttagcagagcgttcttttaatgcagtgcttcctccaaaagataaattccca
tacactataagagtagttgctgaaatattagaaagtaacggttcttcatcaatggctaca
atctgtgcttctactatgtcgcttctttcagctggtgttcctcttaatgctagtgttgct
ggtattgctatgggacttgctacttataaagatggatataaagtgcttacagatatacag
ggtgttgaagaccatttaggagatatggactttaaggttgctggtacacgtaaaggtatc
actgctttccagcttgatattaaacttactggtatatctactcaaatattaaaagaggct
ttagaacaggctaaaaaggcaagatattttatacttgataaaattgaagctactatatct
aaccctaatgagatttcagattttgctcctaagtataaaactatggatgtaaaccctgag
aaaattagagtattgattggacctggaggaaaaaatataaaagctatcattgaagagact
ggaagtgatgttgagatacaagacagcggtgtaattaatatatttgctccagatactcct
actttagataaaactattagccttataaactcttatgttaaagaccctgaggttggtgaa
atttatgacggtgttgtaaaagacattaaagagtttggtgcttttatagagattttacct
ggtgtagaaggactttgtcatatatctgaacttgcttataaacatgttatgaatgtggaa
gaagttttaaagattggcgatgaagtaaaagtaaaaattatagatgttaaaggcggaaaa
tactctttaagcagaaaagctttacttgaaaaacctgctgattatgttgaagaagaaaac
aacaataaaagaaagcatgacagaaaaaagagattttaa
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