Brachyspira pilosicoli B2904: B2904_orf360
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Entry
B2904_orf360 CDS
T02225
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2904_orf360 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpj03021
]
B2904_orf360 (rho)
03019 Messenger RNA biogenesis [BR:
bpj03019
]
B2904_orf360 (rho)
Transcription machinery [BR:
bpj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B2904_orf360 (rho)
Messenger RNA biogenesis [BR:
bpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B2904_orf360 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
Rho_N
OB_RNB
AAA_22
AAA_25
AAA
ESM4
Motif
Other DBs
NCBI-ProteinID:
AFR69716
UniProt:
J9UAV4
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All DBs
Position
335362..336834
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AA seq
490 aa
AA seq
DB search
MSEDNNLEFSADENVVPLKKVRKVRKVVRKVVAKVQEEEKEEIPTTNDEDNNKEEENSNK
IQRPFDVLYISQLSVLTFDELIDFAENYGIKKDTNSNLRRQELMHLIVKSHINLEGKVVA
EGTLETLQDGFGFLRSKNTNYLVGSDDIYISPAQIRLFGLRTGDVISGEVRPPKDNAGEK
FFALLRIESVNGEKPDNLHRRPLFDKLTPIFPNERINLEFAPNKISTRIINLVSPIGKGQ
RGLIVAPPKAGKTMMLQEIANAICKNYPDIKLFILLIDERPEEVTDMKRQVPEAEVIAST
FDELPEKHCQVSEMVLEKAKRLVENKHDVVIILDSITRLSRAYNLVVPASGKVLTGGVDS
NALHKPKKFFGAARNIEEGGSLTIIASALVDTGSKMDDYIYEEFKGTGNMELHLERKFAN
RRIFPAIDIDSSSTRRDDLLLNEEELAKMNLVRSVQGQGINIDEYDFIEKMIAKMKNTKD
NSEFLKLLNS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagataacaatttagagttttctgctgatgaaaatgttgtgcctttgaagaag
gtaagaaaagtaagaaaagttgttagaaaggttgttgctaaagttcaagaagaagaaaaa
gaagaaattcctactactaatgatgaagataataataaagaggaagagaatagtaataaa
attcaaagaccttttgatgtactttatattagccaattaagtgttttaacttttgacgaa
ttaatagattttgctgaaaactacggcattaagaaagatactaacagcaatttaagaaga
caggaattaatgcatttaatagtaaaatctcatattaatttagaaggtaaagttgttgca
gagggtactttagaaactttgcaagacggatttggtttcttacgttctaaaaacacaaat
tatttagtaggttctgatgacatatatatatctcctgcacaaattaggcttttcggactt
agaacaggagacgttattagcggagaagtaagacctcctaaagataatgcaggtgaaaag
ttttttgctttgcttagaatagaatctgttaatggcgaaaaacctgataatttgcataga
agacctttatttgataaactcacaccaatatttcctaatgaaagaattaatttagagttt
gctccaaataaaatttctactcgtattataaacttagtatctcctataggtaaaggccag
aggggattaatagtagcacctcctaaagctggtaaaactatgatgcttcaagagattgct
aatgctatatgtaaaaactatcctgatattaaacttttcattcttcttatagatgagcgt
cctgaagaggttactgacatgaaaagacaagttccagaggctgaagttatagcttctact
tttgatgaacttccagagaagcattgtcaagtttcagagatggtattagagaaggctaag
agattagttgaaaataaacatgatgttgtaattatattagattctataacaagactttca
agggcttacaacttagtagtgcctgcaagcggtaaggtattaacaggaggtgtagattct
aatgcacttcataaacctaaaaaattcttcggtgctgcacgtaatatagaagagggcggc
tctcttacaataattgcttctgctttagttgatactggaagtaagatggacgattatatt
tacgaagagtttaagggtactggtaatatggagcttcatttagagaggaagtttgctaat
agaagaatattccctgctattgatattgattcttcttctactagaagagatgatttactt
cttaatgaggaagagcttgctaagatgaatcttgttagaagcgttcagggtcagggtatc
aatattgatgaatatgactttattgagaagatgatagctaaaatgaaaaatactaaagat
aattctgagtttttaaagttattaaactcatga
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