Burkholderia pseudomallei NCTC 13179: BBK_1349
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Entry
BBK_1349 CDS
T02894
Symbol
gyrB
Name
(GenBank) gyrB: DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpk03032
]
BBK_1349 (gyrB)
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_1349 (gyrB)
Enzymes [BR:
bpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBK_1349 (gyrB)
DNA replication proteins [BR:
bpk03032
]
Prokaryotic type
DNA Topoisomerases
BBK_1349 (gyrB)
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBK_1349 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGZ27195
LinkDB
All DBs
Position
1:1588659..1591127
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AA seq
822 aa
AA seq
DB search
MTEQHNSQPENSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCNDIHVTIHADNSISVTDNGRGIPTDVKLNDKHEPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSSWLRLIVRRDGKKHFMEFHRGIAQNRVLEERDGEQVSPMQV
IGETENRGTEVHFMADPTIFGTVEYHYDILAKRIRELSFLNNGVRIRLTDLRSGKEDDFA
FAGGVKGFVEYINKTKSVLHPTIFHINGEKDSVGVEVAMQWNDSYNENVLCFTNNIPQRD
GGTHLTGLRAAMTRVINKYIADNEIAKKAKVETTGDDMREGLSCVLSVKVPEPKFSSQTK
DKLVSSEVRAPVEEVVAKALEEFLLETPNDAKIICGKIVEAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLVTALGCGIGKDDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYVYIAQPPLYKVKAGRDERYLKDDTELNAHMLRLALQGSELVPTENGTPISG
DALGELARSYLLARGVVERLSRLYDPAALEAVMDGVAIDLSSEASTEASAKALAAMLSDD
SKTEVRVVPAYDAVREQRSLRVERTHHGNVRVSVIDEEFQHTADYQQLVNTANTFKGLIG
AGAAIKRGERSSNVTDFKEAMKWLMADAERNLSKQRYKGLGEMNPEQLWETTMDPAVRRL
LRVQIEDAIAADGIFTTLMGDEVEPRRAFIENNALRAGNIDV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagcataattcgcagcccgaaaatagctacggcgcgtcgtcgatccagatc
ctcgaaggcctggaagcggtgcgcaagcgacccgggatgtacatcggcgacacgtcggac
ggcaccggtctgcaccacctcgtgttcgaggtgctcgacaactcgatcgacgaggcgctc
gccggctactgcaacgacatccacgtgaccatacacgcggacaattcgatctccgtgacc
gacaacggccgcggcatcccgaccgacgtcaagctcaacgacaagcatgagccgaagcgc
tcggccgccgaaatcgtgatgaccgagctgcatgcgggcggcaagttcgaccagaacagc
tacaaggtgtcgggcggcctgcacggcgtcggcgtgtcgtgcgtgaacgcgctctcgagc
tggctgcgcctcatcgtgcgccgcgatggcaagaagcatttcatggaattccatcgcggc
atcgcgcagaaccgcgtgctcgaggagcgcgacggcgagcaggtctcgccgatgcaggtg
atcggcgagaccgagaaccgcggcaccgaagtgcacttcatggccgatccgacgatcttc
ggcaccgtcgaataccactacgacattctcgcgaagcgcatccgcgagctctcgttcctg
aacaacggcgtgcgcatccgcctgaccgacctgcgctccggcaaggaagacgatttcgcg
ttcgcgggcggcgtgaagggcttcgtcgagtacatcaacaagacgaagagcgtgctgcac
ccgacgatcttccacatcaacggcgagaaggacagcgtgggcgtggaagtagcgatgcag
tggaacgacagctacaacgaaaacgtgctgtgcttcacgaacaacatcccgcagcgcgac
ggcggcacgcacttgaccggcctgcgcgcggcgatgacgcgcgtgatcaacaagtacatc
gccgacaacgagatcgcgaagaaggcgaaggtcgagacgaccggcgacgacatgcgcgaa
gggctttcgtgcgtgctctccgtgaaggtgccggagccgaagttcagctcgcagacgaag
gacaagctggtttcgtccgaagtgcgcgcgccggtggaggaagtggtggcgaaggcgctc
gaggagtttctgctcgaaacgccgaacgacgcgaagatcatctgcggcaagatcgtcgaa
gcggcgcgcgcgcgcgatgccgcgcgcaaggcgcgcgagatgacgcgccgcaagggcgtg
ctcgacggcgtgggcctgccgggcaagctcgcggactgccaggagaaggacccggcgaag
tcggaaatctacattgtcgagggcgactcggcgggcggctcggccaagcaggggcgcgac
cgcaagttccaggcgatcctgccgctgcgcggcaaggtgctgaacgtcgagaaggcgcgc
tacgacaagctgctgtcgtccgagcagatcgtcacgctcgtgaccgcgctcggctgcggg
atcggcaaggacgactacaacctcgacaagctgcgctaccaccggatcatcatcatgacc
gatgcggacgtggacggcgcgcacatccgcacgctgctgctgacgttcttctaccggcag
atgccggagatgatcgagcgcggctacgtgtacatcgcgcagccgccgctttacaaggtg
aaggcgggccgcgacgagcgctacctgaaggacgacaccgagctgaacgcgcacatgctg
cgcctcgcgctgcagggctcggagctcgtgccgaccgagaacggcacgccgatctcgggc
gacgcgctcggcgagctcgcgcgctcgtatctgctcgcgcggggcgtggtggagcggttg
agccgcctgtacgacccggccgcgctcgaggcggtcatggacggtgtcgcgatcgatctg
tcgagcgaggcatcgacggaggcgtcggcgaaggcgctggccgccatgctgtccgatgat
tcgaagaccgaagtgcgcgtcgtgccggcttacgatgcggtacgcgagcagcgctcgctg
cgcgtggagcgcacgcatcacggcaacgtgcgcgtatcggtgatcgacgaggaattccag
cacacggccgattatcagcagctcgtgaacaccgcgaatacgttcaagggcttgatcggc
gcgggggcggcgatcaagcgcggcgagcggagctcgaacgtgacggacttcaaggaagcg
atgaagtggctgatggccgacgccgagcggaacctgtctaagcagcggtataaagggttg
ggcgagatgaaccccgagcagctgtgggaaacgacgatggacccggcggtgcggcggttg
ctgcgcgtgcagatcgaggatgcgattgcggccgatgggatctttaccaccctcatgggg
gatgaggtcgagccgcgtagggcgtttatcgagaataatgcgctaagggcggggaatatt
gatgtttga
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