Burkholderia pseudomallei NCTC 13179: BBK_2933
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Entry
BBK_2933 CDS
T02894
Symbol
holB
Name
(GenBank) holB: DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03030
DNA replication
bpk03430
Mismatch repair
bpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBK_2933 (holB)
03430 Mismatch repair
BBK_2933 (holB)
03440 Homologous recombination
BBK_2933 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpk03032
]
BBK_2933 (holB)
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_2933 (holB)
Enzymes [BR:
bpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBK_2933 (holB)
DNA replication proteins [BR:
bpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBK_2933 (holB)
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBK_2933 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
DNApol3-delta_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGZ28650
LinkDB
All DBs
Position
1:3370088..3371122
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AA seq
344 aa
AA seq
DB search
MIYPWQIDDWNRLQALRAHWPHALLLYGQAGIGKLAFARHLAKGFLCETPRENGEPCGAC
AACTWFEQGNHPDYRIVVPEALAAELPGAADEPKAADADEGGKKARTPSKEIKIEQVRAL
VDFCGIASHRGGARVVVLYPAEALNVAAANALLKTLEEPPSGVVFLLASARVDRLLPTIV
SRCRQWPMAVPAPDAAAAWLAAQQVADANALLAEAGGAPLAALALANDENRPLRDWTLAQ
LAAGAACDPFACGETLQKLPVPVVLGWLQRWLYDLLAERAAGAPRYFPAQRAALARCAAA
ADANAFARFLKTVTRQRAVENHPLSARLVFEELFLGYRELFASP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccgtggcagatcgacgactggaaccgcctgcaggcgctgcgcgcgcattgg
ccgcacgcgctgctgctgtacgggcaggcgggaatcggcaagctcgccttcgcgcggcac
ctcgcgaagggcttcttgtgcgagacgccgcgcgagaacggcgaaccgtgcggcgcgtgc
gccgcgtgcacgtggttcgagcagggcaatcaccccgattaccggatcgtcgtgcccgag
gcgctcgcggccgagctgccgggcgcggccgacgagccgaaggccgccgacgccgacgaa
ggcggcaagaaggccaggacgccgagcaaggaaatcaagatcgagcaggtgcgcgcgctc
gtcgacttctgcgggatcgcgtcgcatcgcggcggcgcgcgcgtcgtcgtgctgtatccg
gccgaggcgctgaacgtcgcggccgcgaacgcgctattgaagacgctcgaggagccgccg
tcgggcgtcgtgttcctgctcgcgtccgcgcgcgtcgaccggctgctgccgacgatcgtg
agccgctgccggcagtggccgatggcggtgcccgcgcccgacgcggccgccgcgtggctc
gcggcgcagcaggtggcggacgcgaacgcgctcctcgccgaggcggggggcgcgccgctc
gccgcgctcgcgctcgcgaacgacgagaaccggccgctgcgcgactggacgctcgcgcag
ctcgcggcgggcgccgcgtgcgatccgttcgcgtgcggcgagacgctgcagaaactgccc
gtgcccgtcgtgctcggctggctgcagcgctggctgtacgatctgctcgccgagcgcgcg
gcgggcgcgccgcgctatttccccgcgcagcgcgcggcgctcgcgcgctgcgcggcggcg
gccgacgcgaacgcgttcgcgcgcttcctgaagacggtcacgcggcagcgcgcggtggag
aaccatccgctcagcgcgcgcctcgtgttcgaagagctgtttctcggctatcgggaactg
ttcgcgtcgccctga
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