KEGG   Burkholderia pseudomallei A79A: X996_3517
Entry
X996_3517         CDS       T03498                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K22504  type III secretion system outer membrane ring protein
Organism
bpso  Burkholderia pseudomallei A79A
Brite
KEGG Orthology (KO) [BR:bpso00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpso02044]
    X996_3517
Secretion system [BR:bpso02044]
 Type III secretion system
  Type III secretion core apparatus
   X996_3517
SSDB
Motif
Pfam: Secretin T3S_SPI-1_N0 Secretin_N HSF_DNA-bind
Other DBs
NCBI-ProteinID: AIV93821
LinkDB
Position
2:52125..54002
AA seq 625 aa
MMYADTARRYAAALAASLLMTGAAFAAPTDAAPLADAPAAASATPDARDGDASRVAAPPA
RAPQDDERHFVANDASISVLLNALSGRLHKPIVASEKVRRKHVTGEFDLAQPRALLARLG
ESMSLLWYDDGASIYIYDNSEIKNAVVSMRHATVRNLRDFIRQTRLYDPRFPVRGDDLSN
TFYVTGAPVYVNLVAAAARYLDEVRSNEASDRQVVRVVQLHNSFVVDRQYTLRDKEVDIP
GMATVLGRIFGPARPGAPADSPVAAADATARGGAGGAAGKPAFSLADALPAPLDAGNAPG
GAGSTHSTNPANAASPMGGAAGGVALPASDGVRAVAYPDTNSVILVGRLDKVQDMEALIR
SLDVEKRQIELSLWIIDIRKSRLDQLGIDWQGALNAPGIGVGFNNRGGNVTTLDGTRFLA
SVAALSQTGDATVISRPIVLTQENVPATFDSNQTFYAKLIGERTVQLDHVTYGTLVNVLP
RLTRDGSQVEMIVDIEDGNTDGATSDGQIVIDNNTMPLVNRTEINTVARVPHEMSLLIGG
NTRDDVTRRTFRIPGLASIPLIGGLFRGHSDRHEQVVRVFLIQPKLLRAGAAWPDGQPWE
SGDPADNATLRATVQMLKPYMDDKS
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgatgtatgccgacacggccagacgatacgcagccgcgcttgccgcgtcgctgctgatg
acgggcgcggcgttcgccgcgccgaccgacgcggcgccgctcgccgacgcgcccgcggcg
gcgagcgcgacgcccgacgcgcgggacggcgacgcgtcgcgcgtggccgcgccgccggcg
cgcgcgccgcaggacgacgagcgccacttcgtcgcgaacgacgcgagcatcagcgtgctg
ctcaatgcgctgtcgggccggctgcacaagccgatcgtcgcgagcgagaaggtgcgccgc
aagcacgtgacgggcgagttcgacctcgcgcagccccgcgcgctgctcgcgcggctcggc
gaatcgatgtcgctgctctggtacgacgacggcgcgtcgatctacatctacgacaactcg
gagatcaagaacgcggtcgtctcgatgcgccatgcgacggtgcgcaacctgcgcgatttc
atccggcagacgcggctctacgatccgcgctttccggtgcgcggcgacgacctgagcaac
acgttctacgtgacgggcgcgcccgtctacgtgaatctcgtcgccgccgccgcgcgctat
ctcgacgaggtgcgctcgaacgaggcgagcgaccggcaggtcgtgcgcgtcgtgcagctt
cacaacagcttcgtcgtcgaccgccagtacacgctgcgcgacaaggaagtcgacatcccg
ggcatggcgaccgtgctcggccgcatcttcggcccggcgcggccgggcgcgccggcggac
tcgcccgtcgcggcggccgacgccacggcgcgcggcggcgcgggcggcgcggcgggcaag
ccggcgttctcgcttgccgatgcgttgcccgcgccgctcgacgccggcaacgcgccgggc
ggcgcgggctcgacgcattcgacaaacccggcgaacgccgcgagcccgatgggcggcgcg
gcgggcggcgtcgcgctgcccgcgtcggacggcgtgcgcgcggtggcgtatccggacacg
aacagcgtgatcctcgtcggccggctcgacaaggtgcaggacatggaggcgctgatccgc
tcgctcgatgtcgagaagcggcagatcgagctgtcgctgtggatcatcgacatccgcaag
agccggctcgatcagctcggcatcgactggcagggtgcgctcaatgcgccgggcatcggc
gtcggcttcaacaatcgcggcggcaacgtgacgacgctcgacggcaccaggttcctcgca
tcggtcgcggcgctcagccagacgggcgacgccaccgtgatctcgcggccgatcgtgctc
acgcaggagaacgtaccggcgacgttcgacagcaaccagacgttctacgcgaagctgatc
ggcgagcgcacggtgcagctcgatcacgtgacctacggcacgctcgtcaacgtgctgccg
cggctcacgcgcgatgggtcgcaggtcgagatgatcgtcgacatcgaggacggcaacacc
gacggcgcgacgagcgacggccagatcgtcatcgacaacaacacgatgccgctcgtgaac
cgcaccgagatcaacacggtcgcgcgcgtgccgcacgagatgagcctgctcatcggcggc
aacacgcgcgacgacgtcacgcgccgcacgttccggattcccgggctggccagcattccg
ctgatcggcgggctgtttcgcgggcattcggatcggcacgagcaggtggtgcgcgtgttc
ctgatccagccgaagctgctgcgcgcgggcgcggcctggcccgacggccagccgtgggaa
tcgggcgatccggcggacaacgcgacgctgcgcgcgaccgtgcagatgctcaaaccctac
atggacgacaagtcatga

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