Burkholderia pseudomallei A79A: X996_4894
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Entry
X996_4894 CDS
T03498
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpso
Burkholderia pseudomallei A79A
Pathway
bpso00100
Steroid biosynthesis
bpso00909
Sesquiterpenoid and triterpenoid biosynthesis
bpso01100
Metabolic pathways
bpso01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpso00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
X996_4894
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
X996_4894
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpso01006
]
X996_4894
Enzymes [BR:
bpso01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
X996_4894
Prenyltransferases [BR:
bpso01006
]
Terpene biosynthesis
Squalene/phytoene synthase
X996_4894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIV93113
LinkDB
All DBs
Position
2:complement(1840006..1841055)
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AA seq
349 aa
AA seq
DB search
MGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQR
LELLLSLRAQINGAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAA
VRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLP
GLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLEPG
ASLRARPLMHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDA
WLDPARASKVRRGDVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattccacccgggcctttctgctgggccccctgctgaagggcgtgtcgcgctcc
ttctatctgacgttgcgcgtgctgccgcaaggcatgcgcgacccgatcggccttgcgtat
ctgctcgcgcgcgcggccgacacgatcgccgacacgtcgctgatcccgcccgctcagcgg
ctcgaactgctgctgtcgctgcgcgcgcagatcaacggcgcgcccgatccgcacgcgctc
gcgcggatcgcgggcgaggtcgcggggcagcaggcgcagacggacgagaagacgctgctc
gaatcgctcggccccgcgctcgcggtgctgtcgcaattgagcgcgcccgatcgcgccgcg
gtgcgcggcgtcgtcaccacgctcaccgaagggatggaattcgatttgcgcacgttcccg
gacgaatcgtcgggccgcatcgtcgcgctgcgggaatggccggcgctcgatcgctatacg
tatctcgttgccggctgcgtcggcgaattctggacgaagatgacgtgcgcgcatctgccc
gggctgctgaccgagcgcgaggacacgatgagcgagcgcggcatccgcttcggcaaggcg
ctgcagatgaccaacgtgctgcgcgactgcggcagggacctgcggatcggccgctgctat
ctgccgcaggcgatgctggacgaatacgggctgcgcgcggaggatctgctggagccgggc
gcttcgctgcgcgcacggccgctgatgcatgcgctcgtgcgcacgacgctcgcgcatttt
cacgcgggcatcgattatacgttcgcgattccgcgccgcgcgccgcgcctgcggcttgcc
tgtttctggccgatcgcgatcggcctgcggacgctcgcgctgctcgcgtcgaacgacgcg
tggctcgatccggcgcgcgcgtcgaaggtgcggcgcggcgacgtctaccggatcctcgcg
tattcgctgccgctcgcgatgtcgaacggcgcgctgcgcgcgtggctcgaccgcctgatc
gcggacgtcgaggcgcggctcatcgcgtga
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