Bacillus pumilus MTCC B6033: BW16_13835
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Entry
BW16_13835 CDS
T03175
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpum
Bacillus pumilus MTCC B6033
Pathway
bpum03030
DNA replication
bpum03430
Mismatch repair
bpum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW16_13835 (dnaE)
03430 Mismatch repair
BW16_13835 (dnaE)
03440 Homologous recombination
BW16_13835 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpum03032
]
BW16_13835 (dnaE)
03400 DNA repair and recombination proteins [BR:
bpum03400
]
BW16_13835 (dnaE)
Enzymes [BR:
bpum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BW16_13835 (dnaE)
DNA replication proteins [BR:
bpum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BW16_13835 (dnaE)
DNA repair and recombination proteins [BR:
bpum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BW16_13835 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
CRISPR_Cas2
Motif
Other DBs
NCBI-ProteinID:
AHL72417
LinkDB
All DBs
Position
complement(2617659..2620994)
Genome browser
AA seq
1111 aa
AA seq
DB search
MSYVHLQVHSGYSLLSSAAKVKELVLKAKELGYQALALTDDHVMYGTVEFYKECKTHGIK
PIIGLTASVFIDEQETEAYPLILLAKNNEGYQNLIKISSVLKSKSKTGLKEKWLKAYHHG
LIAITPGVSGYIETLLQHDQLDEARDAASHLKDLFGEEHVYLAVQPFQQDEELSHKLREL
SKRANIPLVATGDVHYIHQEDKTAYTCLKAIKAGQQLSEIEEDQADKHFRSIEEMMKWYG
DDSELLARTVEIANRCEVDLNLGQTKLPTYPTPDQSTADQFLRRVCQEGMKRRQIASNDT
YIKRLEYELSIIQKMNFSDYFLIVWDFMKYAHDHGIVTGPGRGSAAGSLVAYVLFITDVD
PIRHGLLFERFLNPERISMPDIDIDFPDTRRDEIISYVKDKYGDMHVAQIVTFGTLAAKA
ALRDVGRVMGIDSKAADRLAKLIPSKPGTTLKEAVTVSSELKTLLQQSEELQRVFQTALK
VEGLPRHTSTHAAGVVLSEEPLTQVVPIQEGHDGVYLTQYAMNYLEDLGLLKMDFLGLRN
LTLIESIKNQIERQENVHINFSDISYEDQKTFDLLSAGDTTGIFQLESQGMRQVLRRLKP
SSLEDIVAVNALYRPGPMENIPLFIDRKHGRVKVSYPHPDLYDILKDTYGVIVYQEQIML
IAAKMAGFKLGEADLLRRAVSKKDKKVLDEERSHFVEGCLKKEYPVNIANDVYDLIVKFA
NYGFNRSHAVAYSMIGFQLAYLKAHYPLYFMCGLLTSVIGNEDKVAQYFYEAKEKGISVL
KPSINKSEFPFTVEKGEIRYSLRAIKNVGVSAVKDIYRARQERPFEDLFDFCARVSTKSV
NRKTIEALIFSGAMDELHPNRASLLASIDIALDHVSFLTPEDQLDFLGDTTFSIKPKYAE
IDELPLVDLLQFEKEALGLYLSNHPVQAYRDRLRENGAVEIIRLSSYIKRKISMGGLLTK
VKSIRTKNGQSMAFVTFGDETGEMEGVVFPEQFRKLSPLLEEGAMLYVEGRIDVRNESSQ
IIVQEAVLLEEMGSKRKESVYIRVKEENHTQELLEQVKRVISMHSGEADVYLYYEKQKKT
MRLPDAYKVHADHAVIFQLKELLGEQNVVIK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgttcatcttcaggtccacagtggatacagcttattgagcagtgcagcgaag
gtcaaggagctcgtattaaaggcgaaagaacttggctatcaagcgctcgctcttaccgat
gaccatgtgatgtatggaacggttgaattttataaggaatgtaaaacacatggcatcaag
ccgattatcggtttaacagcttctgtcttcatagatgaacaagagacagaggcttatcct
ttgatcctccttgccaaaaataatgaaggctatcaaaacttgatcaaaattagcagtgtc
ttgaaatcaaagtcaaaaaccggcctgaaagagaaatggctgaaagcctatcatcatggc
cttattgccatcacaccaggcgtatccggctatattgaaacgctgctgcaacatgatcag
ctagatgaagcaagggatgcagcgagccatttaaaagatctttttggtgaggaacatgtg
tatttagccgttcagccgtttcagcaggacgaagagctgtctcataagctcagggaactc
tcaaaaagggcgaacatcccgcttgtggcaacaggtgacgtccactatatccatcaagag
gacaaaaccgcatatacatgtttaaaagccattaaagcaggccagcagttatcagaaata
gaggaagaccaagcagacaagcatttcagatcgatcgaagaaatgatgaagtggtatggt
gatgattcagaattactggcaagaacggttgagattgcaaaccgctgcgaggtcgattta
aatcttggtcagacgaaactgccaacctatccgacgcctgatcaatcaacagctgatcag
tttttacgaagagtgtgccaagaaggcatgaaacgaagacagattgcttcaaatgacaca
tatatcaaaaggcttgagtatgagctgagcatcattcaaaaaatgaatttcagtgattat
ttcctcattgtgtgggattttatgaagtatgctcatgatcatggcattgtcacaggtcct
ggccggggatcagcagcaggctctttagttgcgtatgttctgtttattacagatgtcgat
ccgatccgtcacgggcttttatttgagcgttttttaaatcctgaacgaatcagtatgccg
gatatagatatcgattttcctgacacgagaagagatgaaatcatttcatacgtaaaagac
aaatatggggatatgcatgtggcgcaaattgtcacgtttggaacacttgctgcaaaggca
gctttaagagatgtcggacgtgtgatgggaattgattcaaaagcagcagaccgccttgca
aagctcatcccatcaaagccagggacgacactgaaagaagcggtgacagtctcctcagaa
ttaaaaacactgctccagcaatctgaagagctgcaaagagtgtttcaaaccgctttaaag
gtagaaggattaccaagacatacgtcaacacatgcagccggcgttgtcctaagtgaggag
ccgctcacacaagtcgtgcctattcaagaaggccatgatggagtgtatttgacgcaatat
gcgatgaattatttagaagatcttggtcttttaaaaatggattttttaggtttgagaaac
ttaacattaattgaatccattaaaaaccagattgaaagacaggaaaacgtccacattaac
tttagtgacatttcatatgaagatcagaaaacgtttgatttgttatcagcgggagataca
acggggattttccagctggagtcacaaggtatgcgtcaggtgctgagacgactgaaacct
tctagtctagaagatatcgtggctgtcaatgccttataccgcccggggccgatggagaat
atcccgctctttatcgaccgaaagcatggcagagtgaaagtctcctacccgcatccagat
ttgtatgacatcttaaaggatacatatggggtcatcgtctatcaggagcaaatcatgctg
attgcagcaaagatggcaggctttaagctgggcgaggccgatctactaagaagagccgtt
tcaaagaaggataaaaaggtgcttgatgaagagcgaagccattttgttgaaggatgccta
aaaaaggagtatcctgttaacattgcaaatgacgtttatgacctaatcgtcaaatttgca
aactatggttttaatagaagccatgctgttgcatatagcatgatcggctttcagcttgct
tatttaaaagcgcattatccgttatattttatgtgcggtcttttaacgagtgtgattgga
aatgaagacaaagtggctcaatatttctatgaggcaaaggaaaaagggatatctgtgttg
aagccttctattaataagagcgaatttccattcacggttgaaaaaggggagatccgctac
agcttaagagccatcaaaaatgtcggagtgtcagctgtaaaggatatatacagagcaaga
caggaaaggccatttgaagatttatttgatttttgcgcaagggtatcaacaaagagtgtc
aaccgaaaaacgattgaagccctcattttctcaggggcaatggatgagcttcatccaaat
cgtgcttcgttattagcatcgatagatattgcgttagaccatgtgtcatttttaacacct
gaggatcagctggactttcttggggatacaacgttctccattaagccaaaatatgcggag
atagacgaactgccgcttgttgatctcctgcaatttgaaaaagaagcactcgggttatat
ttatcaaatcaccctgtacaagcgtatcgagatcgcttaagagagaatggtgcggtggaa
ataatcagactttcttcctatataaagcgaaagatctcaatgggtggtcttttgacaaag
gtgaaatcgattcggacaaaaaatggacaatcgatggcatttgtcacattcggggatgaa
acgggagaaatggaaggtgtcgtctttccagagcaatttagaaagctgtcccccttactt
gaggagggcgcaatgctttatgttgaaggcagaatagatgtcagaaatgagagcagtcaa
atcatcgtgcaagaagctgttctactggaagagatgggctctaaaagaaaagaatctgtc
tacattcgagtcaaagaagagaaccatacgcaggaactgctagaacaagtgaagcgagtg
atctccatgcacagcggagaagcagatgtctatttgtattatgaaaagcaaaaaaagacg
atgagacttccagatgcatacaaagttcatgcagatcatgcggtcattttccagttaaaa
gagctgctaggtgaacaaaacgttgtgattaaatga
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