Bacillus pumilus SH-B9: UP12_17725
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Entry
UP12_17725 CDS
T04776
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UP12_17725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_17725
Enzymes [BR:
bpus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UP12_17725
DNA repair and recombination proteins [BR:
bpus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UP12_17725
Prokaryotic type
UP12_17725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
WipA_Phos
Motif
Other DBs
NCBI-ProteinID:
AMM99081
LinkDB
All DBs
Position
complement(3490799..3491479)
Genome browser
AA seq
226 aa
AA seq
DB search
MKPFLNDSWWAVMKSEFEQPYYQELREWMKEEYRTQTVFPKPDDVYRALHLTSYEEVKVV
ILGQDPYHGLGQAHGLSFSVQPGVKHPPSLRNIFQELKDDLGCPVPNHGSLVSWAEQGVL
LLNTVLTVRKGEANSHKGKGWERVTDRVIDVLNERDQPVVFVLWGRHAQNKKERIDQNKH
YIIESPHPSPFSARNGFFGSRPFSKVNAYLNQMGIEEINWCIQDIE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatttttaaatgatagctggtgggctgtgatgaaaagtgaatttgaacagcca
tattatcaagaattacgtgaatggatgaaggaggaataccgcacgcagaccgtttttccg
aaaccggatgacgtttatcgtgcgcttcatttgacgtcttatgaagaagtcaaagttgtg
attttgggacaagacccttatcatggcctaggtcaggcacatggattaagcttttcagtt
cagcctggcgtgaagcatccgccatcgttgagaaatatttttcaggagctaaaggatgat
cttggctgtcctgttccaaatcacggctcacttgtgagctgggcagagcaaggtgtgctg
ctcttaaacactgtgctgaccgtgagaaagggcgaggcgaactctcataaaggcaagggc
tgggaacgtgtgacagaccgcgtgattgatgtgctgaatgaacgtgatcagcccgtcgtt
tttgtgctgtggggaagacatgctcaaaataagaaagaacgcattgatcaaaacaagcat
tacatcattgagtcacctcatccaagtcctttttctgcaagaaacggcttttttggcagt
cgtccgttctcaaaggtaaacgcgtatttaaatcaaatggggattgaagaaatcaattgg
tgtatccaagatattgaataa
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