Brachyspira pilosicoli WesB: WESB_2137
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Entry
WESB_2137 CDS
T02412
Symbol
dnlJ
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bpw
Brachyspira pilosicoli WesB
Pathway
bpw03030
DNA replication
bpw03410
Base excision repair
bpw03420
Nucleotide excision repair
bpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WESB_2137 (dnlJ)
03410 Base excision repair
WESB_2137 (dnlJ)
03420 Nucleotide excision repair
WESB_2137 (dnlJ)
03430 Mismatch repair
WESB_2137 (dnlJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpw03032
]
WESB_2137 (dnlJ)
03400 DNA repair and recombination proteins [BR:
bpw03400
]
WESB_2137 (dnlJ)
Enzymes [BR:
bpw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
WESB_2137 (dnlJ)
DNA replication proteins [BR:
bpw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WESB_2137 (dnlJ)
DNA repair and recombination proteins [BR:
bpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
WESB_2137 (dnlJ)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WESB_2137 (dnlJ)
MMR (mismatch excision repair)
DNA ligase
WESB_2137 (dnlJ)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WESB_2137 (dnlJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
HHH
RNA_ligase
HHH_3
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
CCG57600
UniProt:
K0JM80
LinkDB
All DBs
Position
2375520..2377511
Genome browser
AA seq
663 aa
AA seq
DB search
MNLEEARKKIEQLTATINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP
TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFYNRMQKELNTSKIKYTVENKFDGL
ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMNNVPKSIKETKKLIVRGEALITKKDFE
ILNKEREELEEIPFANARNAASGGLRQLDSSESKKRRLKFFAYQIANYKDFDLTNEYKSM
EFLSELGFTVEGVHPNIDAEKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKYQEKLGFLS
RAPRFAVAFKFKPEEKETILKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEI
KSKDIRIGDTVVVIRSGDVIPKIVRVVLEKRPSDSKVFEFPKKCPVCGGDTAVTDGDVIV
RCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKF
ERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIDNFKKATIDD
LQNIEGIGEISAKSIYDFLHNKKTLKLIDDLLDAGVNPVFEKLTTVESPLTGKNVVITGS
IEGFTRNSAKEAAERLGATVQSAVSKNTDILIVGEKAGSKLKKAQELGIQIMEADDFIKL
ANI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagaagaagctagaaaaaaaatagaacaattaactgcaactattaactatcac
aataaactttactatacagatgataaccctgaaatagaagactatgaatatgataaacta
tttagagaattagaaaatcttgagagagagtttccagagttaaaaaaagatgatagccct
actaacaaggttggaggcactatactagaaaagtttgagaaatttgaacaccctattgca
atgtactctctttctaatgttatgaatgaagaagagtttttggaattctacaacagaatg
caaaaagaactcaatactagtaaaatcaaatatactgttgaaaataaatttgacggtctt
gctttagagttaatatacgaaaaaggaaaacttactgttgctagcactagaggagacgga
caggttggagagaatgttaccaataatgtaaagatgatgaataatgttccaaaaagcata
aaagagacaaaaaaactcattgtacgtggagaggcactaataacaaaaaaagattttgaa
atcttaaacaaagagagagaagaactcgaagagataccttttgctaatgcaagaaatgca
gcatcaggaggattaagacaattagacagttctgaaagtaaaaaaagaagattaaaattc
tttgcttatcagattgctaattataaagattttgatttaactaatgaatataaatcaatg
gagtttttatcagaattaggctttacagtagaaggcgttcacccaaatattgatgctgaa
aaagtattagaaacttattatgatatacaagaaaaaagaagcaaaatggattatgagatt
gacggacttgtaataaaagttgatgatgttaagtatcaggagaaattaggatttttatca
cgagctccaaggtttgcggttgcgtttaagtttaagccagaagagaaagaaactatttta
aaaaacatagaagtacaagttggacgcactggggcattaacacctgttgctaaattagag
cctgttcaagttggaggggttactgtttcaaatgttacacttcataaccctaacgagata
aaatcaaaagatataagaataggagatactgttgtagttatacgttcgggagatgttata
ccaaaaattgtaagagtagtattagaaaaaagaccttcagacagtaaagtttttgagttt
cctaaaaaatgtcctgtttgcggaggcgatactgctgtaactgacggtgatgtaattgta
agatgtattaatgaagaatgtccaagcaagattacaagatatatagaatattttgtttca
aagcctgctatgaatatggagagaataggaaaggagtggattgcagtatttacaaaaagc
ggacttgttaaaactcctgcagatctttacaaaataactagagatgatttatttaagttt
gaaagaatgggtgaaaaattagcaggatacatgcttgaatctattgagaatagtaagaac
actactttaaaaagatttatatatgcattaggtattcgtcaggttggggaaactactgct
gacttactagctaaatattttacatcaatagataattttaaaaaggctactattgatgat
ttacaaaatattgagggcataggagaaatcagtgctaaaagtatttacgattttcttcat
aataaaaagacattgaaattgatagatgatttacttgatgctggggttaatcctgtattt
gaaaaacttacaactgtagaatcacctctcactggaaaaaatgttgtaataacaggctct
atagaaggctttacaagaaattctgcaaaagaggctgccgagagattaggtgcaactgtg
caatctgcagtatcaaaaaacacagacattttaatcgtaggtgaaaaagcaggaagcaaa
ttaaaaaaagctcaagaattaggcattcaaataatggaagccgatgattttataaagctt
gctaatatatag
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