KEGG   Brachyspira pilosicoli WesB: WESB_2137
Entry
WESB_2137         CDS       T02412                                 
Symbol
dnlJ
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bpw  Brachyspira pilosicoli WesB
Pathway
bpw03030  DNA replication
bpw03410  Base excision repair
bpw03420  Nucleotide excision repair
bpw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WESB_2137 (dnlJ)
   03410 Base excision repair
    WESB_2137 (dnlJ)
   03420 Nucleotide excision repair
    WESB_2137 (dnlJ)
   03430 Mismatch repair
    WESB_2137 (dnlJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpw03032]
    WESB_2137 (dnlJ)
   03400 DNA repair and recombination proteins [BR:bpw03400]
    WESB_2137 (dnlJ)
Enzymes [BR:bpw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WESB_2137 (dnlJ)
DNA replication proteins [BR:bpw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WESB_2137 (dnlJ)
DNA repair and recombination proteins [BR:bpw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WESB_2137 (dnlJ)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WESB_2137 (dnlJ)
   MMR (mismatch excision repair)
    DNA ligase
     WESB_2137 (dnlJ)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WESB_2137 (dnlJ)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT DNA_ligase_ZBD HHH RNA_ligase HHH_3 RUBY_RBDX
Other DBs
NCBI-ProteinID: CCG57600
UniProt: K0JM80
LinkDB
Position
2375520..2377511
AA seq 663 aa
MNLEEARKKIEQLTATINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP
TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFYNRMQKELNTSKIKYTVENKFDGL
ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMNNVPKSIKETKKLIVRGEALITKKDFE
ILNKEREELEEIPFANARNAASGGLRQLDSSESKKRRLKFFAYQIANYKDFDLTNEYKSM
EFLSELGFTVEGVHPNIDAEKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKYQEKLGFLS
RAPRFAVAFKFKPEEKETILKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEI
KSKDIRIGDTVVVIRSGDVIPKIVRVVLEKRPSDSKVFEFPKKCPVCGGDTAVTDGDVIV
RCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKF
ERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIDNFKKATIDD
LQNIEGIGEISAKSIYDFLHNKKTLKLIDDLLDAGVNPVFEKLTTVESPLTGKNVVITGS
IEGFTRNSAKEAAERLGATVQSAVSKNTDILIVGEKAGSKLKKAQELGIQIMEADDFIKL
ANI
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaacttagaagaagctagaaaaaaaatagaacaattaactgcaactattaactatcac
aataaactttactatacagatgataaccctgaaatagaagactatgaatatgataaacta
tttagagaattagaaaatcttgagagagagtttccagagttaaaaaaagatgatagccct
actaacaaggttggaggcactatactagaaaagtttgagaaatttgaacaccctattgca
atgtactctctttctaatgttatgaatgaagaagagtttttggaattctacaacagaatg
caaaaagaactcaatactagtaaaatcaaatatactgttgaaaataaatttgacggtctt
gctttagagttaatatacgaaaaaggaaaacttactgttgctagcactagaggagacgga
caggttggagagaatgttaccaataatgtaaagatgatgaataatgttccaaaaagcata
aaagagacaaaaaaactcattgtacgtggagaggcactaataacaaaaaaagattttgaa
atcttaaacaaagagagagaagaactcgaagagataccttttgctaatgcaagaaatgca
gcatcaggaggattaagacaattagacagttctgaaagtaaaaaaagaagattaaaattc
tttgcttatcagattgctaattataaagattttgatttaactaatgaatataaatcaatg
gagtttttatcagaattaggctttacagtagaaggcgttcacccaaatattgatgctgaa
aaagtattagaaacttattatgatatacaagaaaaaagaagcaaaatggattatgagatt
gacggacttgtaataaaagttgatgatgttaagtatcaggagaaattaggatttttatca
cgagctccaaggtttgcggttgcgtttaagtttaagccagaagagaaagaaactatttta
aaaaacatagaagtacaagttggacgcactggggcattaacacctgttgctaaattagag
cctgttcaagttggaggggttactgtttcaaatgttacacttcataaccctaacgagata
aaatcaaaagatataagaataggagatactgttgtagttatacgttcgggagatgttata
ccaaaaattgtaagagtagtattagaaaaaagaccttcagacagtaaagtttttgagttt
cctaaaaaatgtcctgtttgcggaggcgatactgctgtaactgacggtgatgtaattgta
agatgtattaatgaagaatgtccaagcaagattacaagatatatagaatattttgtttca
aagcctgctatgaatatggagagaataggaaaggagtggattgcagtatttacaaaaagc
ggacttgttaaaactcctgcagatctttacaaaataactagagatgatttatttaagttt
gaaagaatgggtgaaaaattagcaggatacatgcttgaatctattgagaatagtaagaac
actactttaaaaagatttatatatgcattaggtattcgtcaggttggggaaactactgct
gacttactagctaaatattttacatcaatagataattttaaaaaggctactattgatgat
ttacaaaatattgagggcataggagaaatcagtgctaaaagtatttacgattttcttcat
aataaaaagacattgaaattgatagatgatttacttgatgctggggttaatcctgtattt
gaaaaacttacaactgtagaatcacctctcactggaaaaaatgttgtaataacaggctct
atagaaggctttacaagaaattctgcaaaagaggctgccgagagattaggtgcaactgtg
caatctgcagtatcaaaaaacacagacattttaatcgtaggtgaaaaagcaggaagcaaa
ttaaaaaaagctcaagaattaggcattcaaataatggaagccgatgattttataaagctt
gctaatatatag

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