Paraburkholderia phenoliruptrix: BUPH_00219
Help
Entry
BUPH_00219 CDS
T02300
Name
(GenBank) DNA ligase
Organism
bpx
Paraburkholderia phenoliruptrix
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AFT87690
UniProt:
K0DRU3
LinkDB
All DBs
Position
2:complement(49811..51517)
Genome browser
AA seq
568 aa
AA seq
DB search
MKRFAALYAALDATTSTHDKLEALTSYFSVADPEDAAWASYFLAGGKPRQSVPTRLLTEF
ARERAGLPAWLFEESYHAVGDLAETIAHILPPAQRTSELGLTQWIEQRVLTLRGLAPEAL
RTRLFSYWDELDWSGRFLLTKLIGGGFRVGVARQLVVRALAEVAGVDHKRIAQRMVGWTD
SRQKPDAARYLRLIAPDVSEAAARDGADGADGAQPAGERHDSDLGLPYPFFLAHPLQADP
QTLGDPSRWLIEWKWDGIRAQLVKRAGRVWLWSRGEDLITDRFPEVVALGEALPDGFVID
GEILAWEPGGAMPLPFARLQPRIARKTLSKKILADSPAALLAYDLLEAHGEDLRMTPLAD
RRARLDTLAASLGDSLAGDLLRVSPLVCGTDWQALAALREESRARGVEGLMLKERESLYG
VGRTKASGTWWKWKIDPYAVDAVLVYAQRGHGRRASLYTDFTFAVWDEANGVRTLVPFAK
AYSGLTDEEMRQVDAIVRKTTIEKFGPVRSVTPTLVFEIGFEGIQASTRHKSGVAVRFPR
MLRWRTDKHIDDADTLAMLKGFIDDRAA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttcgctgctctctacgccgcgctcgacgcaacgacgtccacgcatgacaag
ctcgaagcactgaccagctatttttcggtagccgatccggaagatgctgcatgggcatcc
tacttcctagcaggcggcaagccgcggcagtcggtgcctacgcgtctgctcaccgagttc
gcgcgcgaacgcgcgggcctgcccgcgtggcttttcgaggagtcgtatcacgcggtcggc
gatctcgcggagactatcgcgcatattctgccgcccgcgcagcgcacttccgaactggga
ctcacgcaatggatcgagcagcgtgtgctcacgttgcgcgggctcgcgcccgaagcattg
cgcacgcggctcttcagctattgggacgaactcgactggagcggccgttttctgctcacg
aagctgataggcggcggttttcgcgtcggcgttgcgcggcaactggtggtgcgagcgctc
gccgaggtggcgggtgtcgaccacaagcggatcgcacaacgcatggtcggatggaccgat
tcgcgacagaagccggatgccgcgcgctatctgcgcctcatcgcgcctgacgtgtccgag
gcggcggcgcgggacggcgccgacggcgcggacggcgctcagcctgcaggcgagcgtcac
gacagcgatctcggtttgccgtatccgttttttctcgcgcatccgctgcaggcggatccg
caaacgctcggcgatccgtcgcgctggctgatcgaatggaagtgggacggcatacgcgcg
caactcgtcaagcgcgcgggacgcgtgtggttgtggtcgcgcggcgaggatctcatcact
gatcgttttcctgaagtcgtggcactgggcgaggcgctgccggacggcttcgtcattgat
ggcgagatactcgcgtgggagccgggcggtgccatgccgctgccgttcgcgcgtctgcaa
ccgcgcatcgcacgcaagacgctgagcaaaaaaattctcgctgattcgcccgctgcattg
ctcgcttacgacctgctcgaagcccacggcgaagatctgcgcatgacgccgcttgcagac
cggcgtgcacgtctggacacgcttgctgcatcgctcggcgattcgctcgcgggcgatctg
ctgcgggtatcgccgctcgtctgcggaaccgattggcaggccctggcggcgctgcgcgaa
gagagccgcgcgcgcggcgtggaaggcctgatgctcaaggagcgcgagtcgctatacggc
gtgggccgcacaaaggcctcgggcacgtggtggaaatggaagatcgacccttacgcggtc
gatgccgtactggtttacgcgcagcgcggacatgggcgccgcgcgagcctgtacacggat
ttcacgttcgcagtgtgggacgaagcgaacggcgtgcgcacgctcgtccctttcgcgaag
gcgtattcgggtcttaccgatgaggaaatgcgccaggttgacgccattgtgcgcaagact
acgatcgagaaattcggaccggtgcgcagcgtcacgccgacactcgtcttcgaaatcggc
tttgaaggcattcaggcgagcacgcgtcacaagtccggcgtggcggtgcgcttcccgcgc
atgctgcgctggcgcacggacaagcatatcgacgacgccgatacgctcgcaatgctgaaa
ggctttatcgacgatcgtgcggcctag
DBGET
integrated database retrieval system
