Paraburkholderia phytofirmans PsJN: Bphyt_3468
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Entry
Bphyt_3468 CDS
T00765
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00470
D-Amino acid metabolism
bpy00550
Peptidoglycan biosynthesis
bpy01100
Metabolic pathways
bpy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bphyt_3468
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Bphyt_3468
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Bphyt_3468
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpy01011
]
Bphyt_3468
Enzymes [BR:
bpy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Bphyt_3468
Peptidoglycan biosynthesis and degradation proteins [BR:
bpy01011
]
Precursor biosynthesis
Amino acid ligase
Bphyt_3468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATPgrasp_ST
TTL
ATP-grasp
ATPgrasp_YheCD
PPR
Motif
Other DBs
NCBI-ProteinID:
ACD17858
UniProt:
B2SYX3
LinkDB
All DBs
Position
1:complement(3901679..3902620)
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AA seq
313 aa
AA seq
DB search
MSSIDPKQFGKVAVLLGGNSAEREVSLNSGRLVLQGLRDAGVDAHPFDPAERPLAALKEE
GFVRAFNALHGGYGENGQIQGALDFYGIKYTGSGVLGSALGLDKFRTKLVWQQLGIPTPP
FEAVLRGDDYEARSKEIVAKLGLPLFVKPASEGSSVAVIKVKSADALPAALIEAVKYDKI
VVVEKSVEGGGEYTACIAGNLDLPVIRIVPAGEFYDYHAKYIANDTQYLIPCGLAADEEA
RLKVLARRAFDVLGCTDWGRADFMLDADGNPYFLEVNTAPGMTDHSLPPKAARAVGISYQ
ELVVGVLALTLQD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtattgacccgaaacaattcggcaaggtggcagtactcctcggcggcaattcc
gccgagcgcgaggtatcgctcaactccggccgcctggtactgcaaggtctgcgcgacgcc
ggcgtggacgcgcatccgttcgacccggccgagcgtccgctcgccgcgttgaaggaagaa
ggcttcgtgcgcgcgttcaacgcgctgcatggcggctacggcgagaacggccagattcag
ggtgcgctcgacttttacggcatcaagtacacgggtagcggcgtgctcggctcggcgctc
ggtctggataaattccgcaccaagctcgtgtggcagcaactcggcattccgacgccgccg
ttcgaagccgtgttgcgcggcgacgactacgaagcgcgctcgaaagagatcgtcgcgaag
ctcggcttgccgcttttcgtgaagccggcgagcgaaggttcgagcgtcgcggtgatcaag
gtgaagagcgccgacgcattgccggccgcgctgatcgaagcggtcaagtacgacaagatc
gtggtggtggaaaagagcgttgaaggcggcggcgaatacaccgcttgcatcgcaggcaat
ctggatctgccggtgatccgcatcgtgccggccggcgagttttacgactatcacgcgaag
tacatcgcgaacgacacgcagtacctgatcccgtgcggtttggcggcggacgaggaagct
cgcctgaaagtgctcgcgcgccgtgcgttcgacgtgcttggctgcaccgactggggccgc
gcggatttcatgctcgacgccgacggcaacccgtatttcctcgaagtgaacacggcgccc
ggcatgaccgatcactcgctgccgccgaaagcggcgcgcgcggtgggcatcagctatcag
gaactggttgtcggcgtattggcgctgacgttgcaggactaa
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