Paraburkholderia phytofirmans PsJN: Bphyt_3475
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Entry
Bphyt_3475 CDS
T00765
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00300
Lysine biosynthesis
bpy00550
Peptidoglycan biosynthesis
bpy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bphyt_3475
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Bphyt_3475
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpy01011
]
Bphyt_3475
Enzymes [BR:
bpy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Bphyt_3475
Peptidoglycan biosynthesis and degradation proteins [BR:
bpy01011
]
Precursor biosynthesis
Amino acid ligase
Bphyt_3475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACD17865
UniProt:
B2SYX5
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All DBs
Position
1:complement(3910563..3912110)
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AA seq
515 aa
AA seq
DB search
MSMLRKKHPAQRQIADALAWLHAHVRPGAHLHADTRSLAAGDAFFAYAVDGADNRPFIEG
AIERGAAAVLVQPEGFSGAIDPSNTLAVPALNELAGSIASGWYNDPSDSMLTLGVTGTNG
KTSCSQWISAALTALGTRCAIIGTLGSGLPGHLVHTGFTTPDAPQLQRSLAQLRDAGAQA
VAMEVSSHALHQGRVNGTAFDIAVFTNLTQDHLDYHHTFEAYEAAKARLFAWPDLRAAVI
NRDDAAGRRLLASTQGHARTIAYGLDDTLQDAPKADALLLASNVRATATGTAFHLSTSDW
GNAEVEVQTLGAFNVSNLLGVLGALLAADVPFNAAVAELAKLESVNGRMQRLGGRLQNDE
PLVVIDYAHTPDALEKTLEALRPMATARGGELICMFGCGGDRDATKRPLMGAIAEKIADG
VVVTSDNPRSEDPQAIIEQIAAGMKDASKARRIEDRASAILQAIRSAAREDVIVLAGKGH
EATQEIMGKKRAFSDQDHARLALAARATHARGGGE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttgcggaagaagcatcccgcacagcggcagatcgccgacgccctcgcctgg
ctgcatgctcacgtgcggccaggcgcgcatctgcacgccgacacgcgctcgctcgcggcc
ggcgacgcgtttttcgcctacgccgtggatggcgcggacaaccgcccgttcatcgaaggc
gccatcgaacgtggcgccgccgccgtgctggttcagcccgaaggcttcagcggcgcgatc
gatccgtcgaacacgctggcggtgccggcgttgaacgaacttgccggttcgatcgcgagc
ggctggtacaacgatccgagcgacagcatgctgacgctcggcgtcaccggcacgaacggc
aagacctcgtgcagccagtggatctcggcggcgctgacggcgctcggcacgcgctgcgcg
atcatcggcacgctcggctccggcttgccgggccacctggtgcacaccggctttactacg
cccgacgcgccgcaattgcagcgcagtctcgcgcagttgcgcgatgcgggcgcgcaggcg
gtggccatggaagtgtcgtcgcacgcgctgcatcagggccgcgtgaacggcacggcgttc
gacatcgccgtattcacgaatctcacgcaagaccatctcgactatcaccacacgttcgaa
gcctacgaagccgccaaagcgcgtctgttcgcgtggccggacctgcgcgcggccgtgatc
aatcgcgacgatgccgccggccgccgcttgctcgcgagcacgcaaggccatgcacgcacg
atcgcctacgggctcgacgacacactgcaagacgcgccgaaagccgacgcgcttctgctc
gcttcaaacgtgcgcgccaccgccacgggcacggcgttccatctgagcacctcagattgg
ggcaatgccgaagtcgaagtgcaaacgctcggcgcgttcaacgtgagcaatctcctcggc
gtgctgggcgcattgctcgccgccgacgttccgttcaacgccgccgtggccgaactggca
aagctcgaatcggtgaacggccgcatgcagcgtctcggtggccgcttgcaaaacgacgaa
ccgctcgtcgtgatcgattacgcgcacacgccggacgcgctggaaaaaacactcgaagcg
ttgcgcccgatggccaccgcgcgcggcggcgaactgatctgcatgttcggctgcggcggt
gaccgcgacgccaccaagcgtccgttgatgggcgcgatcgccgagaaaatcgccgacggc
gtcgtggtgaccagcgacaacccacgcagcgaagatccgcaggccatcatcgagcagatc
gcggctggaatgaaagacgcgtcgaaggcgcgccgtatcgaggaccgcgcgagcgcgatc
ctgcaagcgatccgcagcgcggcgcgcgaagacgtcatcgtgctggccggcaaggggcac
gaagcaacacaggaaatcatgggcaagaaacgcgctttctccgatcaggaccacgctcgc
ctcgcgctggccgcacgcgcgacgcacgcacgcggaggtggcgaatga
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