Paraburkholderia phytofirmans PsJN: Bphyt_5292
Help
Entry
Bphyt_5292 CDS
T00765
Name
(GenBank) ATP dependent DNA ligase
Organism
bpy
Paraburkholderia phytofirmans PsJN
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Rbx_binding
Motif
Other DBs
NCBI-ProteinID:
ACD19651
UniProt:
B2TDE0
LinkDB
All DBs
Position
2:complement(1471356..1473032)
Genome browser
AA seq
558 aa
AA seq
DB search
MKRFAALYTALDATTSTHDKLEALTSYFAVAEPEDAAWASYFLAGGKPRQSVPTRLLTEI
ARERAGLPAWLFEESYHAVGDLAETIAHILPPAQRSSELGLTQWIEQRVLTLRGVSPEEL
RTRLLSYWDELDWGGRFLLTKLIGGGFRVGVARQLVVRALAEVAGVDHKRIAQRMVGWTD
SQQKPDAARYLRLIAPEATGDETQAGDHPHESDLGLPYPFFLAHPLQADPATLGDPSQWQ
IEWKWDGIRAQLVKRGGRVWLWSRGEDLITDRFPEVAALGEALPDGFVVDGEILAWERGD
MAPLPFARLQPRIARKTLTKKILADSPATLLAYDLLEARGQDLRMTPLVERRARLEALAV
SIEGTLAQDLLRVSPLVDAVDWQALAALRDESRARGVEGLMVKQRESMYGVGRTKASGTW
WKWKIDPYAIDAVLLYAQRGHGRRASLYTDFTFAVWDEANGVRTLVPFAKAYSGLTDEEM
RQVDAIVRKTTIEKFGPVRSVTPTLVFEIGFEGIQASPRHKSGVAVRFPRMLRWRTDKHI
DDADTLAMLKGFIDDRAG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttcgccgccctctacactgcgctcgacgcaaccacgtccacgcacgacaaa
ctcgaagcgcttaccagctacttcgccgtggccgaaccggaagacgccgcgtgggcgtcg
tattttctcgccggcggcaaaccgcgccaatcggtgccgacgcgtctgctgaccgagatc
gcccgcgagcgtgccggcttgcccgcatggttattcgaagagtcttatcacgcagtgggc
gatctggccgaaaccatcgcccatatcctgccgcccgcgcaacgcagttcggaattgggt
ctcacgcaatggatcgagcaacgcgtgctcactctgcgtggcgtgtcgccggaagagttg
cgcacgcgtttgctcagctactgggacgaactcgattggggcggccgtttcctgctgacc
aaactgatcggcggcgggtttcgggtgggcgttgcgcggcaactggtggtgagggcgctc
gcggaagtcgcgggtgtcgatcataagcggatcgcgcagcgcatggtcggttggaccgac
tcgcagcagaagcccgatgccgcgcgctatctgcgtttgatcgcaccggaggcaacaggc
gatgagacgcaggccggagatcatccacacgagagcgacctcggcctgccgtatccgttc
tttctcgcgcatccattgcaagccgatccggcgacgctcggcgatccgtcgcaatggcag
atcgaatggaagtgggatgggattcgcgcgcaactcgtcaaacgtggcgggcgtgtctgg
ctatggtcacgcggcgaggatctgatcacggatcgcttcccagaagtagcggcgttgggt
gaggccttgccggatggtttcgtggtcgacggagaaattctcgcgtgggaacgcggcgac
atggcgccattgccgttcgcgcgcttgcaaccgcgcattgcccgcaaaacgctgactaaa
aaaatcctcgccgattcgccggctacgctgcttgcctacgatttgctcgaagcgcgcggc
caggacctgcgcatgacgccgctcgtcgagcggcgcgcacgactggaggcgctggctgtt
tcaatcgaaggcacgctcgcgcaagatctgctgcgcgtgtcgccactggttgatgcagtg
gactggcaggcgcttgctgcgttacgtgacgagagccgcgcgcgtggcgtggaagggctc
atggtcaagcaacgcgaatcgatgtacggcgtgggccgcaccaaagcctccggcacgtgg
tggaaatggaagatcgatccgtatgcaatcgatgcggtgttgctctacgcacaacgcggc
cacggccgccgtgcaagtctctacaccgatttcactttcgcggtatgggacgaggcgaac
ggcgtacgcacgttggtgccgttcgcgaaagcttattccggtctaaccgacgaagaaatg
cgccaggtggacgcgatcgtgcgcaagaccacgatcgaaaaatttggccccgtgcgcagc
gtcacgcccacgctggtcttcgaaattggcttcgaaggcattcaggcgagtccccgtcat
aagtccggcgtagcggtgcgttttccgcgcatgctgcgctggcggaccgataaacatatc
gacgacgccgatacgttggcgatgctaaagggcttcatcgacgatcgtgcgggataa
DBGET
integrated database retrieval system
