KEGG   Bombus pyrosoma: 122573143
Entry
122573143         CDS       T07776                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
bpyo  Bombus pyrosoma
Pathway
bpyo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122573143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpyo03400]
    122573143
Enzymes [BR:bpyo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122573143
DNA repair and recombination proteins [BR:bpyo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122573143
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase LIG3_BRCT CbiK mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 122573143
NCBI-ProteinID: XP_043595090
LinkDB
Position
LG11:complement(15903401..15930485)
AA seq 1012 aa
MSMSDEEKEEEKPFAVERAKSGRAKCKKCKCPIEKDTVRIAKLVANPFSDGKMKAWYHLS
CLFEVFARQRATTKRIDDPEEDVSGWQDLCDEDKTAILQRIEEFENSSPFKTPKMTPAAN
QSSGSKKRKLTRTTESDPSPNKKPRKKEKNGSTSTIDDASDISGSEKTPEKVRKPTRDDA
FQEFQRVCDNVAKVDAYTDKTAILRKMLTRGSEGDGFNSDVKLWCRMLLPGAVKRIYNLQ
SKQLVKLFSRILLEDEDEMLEHLEQGDVSETIRVFFEKSVALKPAAKSVLTIQEVDEFLQ
QLSFLTKEDEQICHFRSIVSRCTAGDLKMIIRLIKHDLRINAGPKHILAAVHDDAYKAFQ
TSRDLDSVIERCWRGSSKFDKPSSSPGSSSNVKITLSLMTPVLPMLAEACKSVEMAMKKC
PNGMLAEVKYDGERVQVHKKGNEFRYFSRSLKPVLPHKVNLFKNYIPKAFPDGDDLILDS
EILMIDTKTGQPLPFGTLGIHKKAEFKDANACLFIFDCIYYNGVVLLHKPMMERRRILRE
SMTEIPNRIMLSEIKEVYKSQDLAEMIARVLKMGLEGLVLKDIHSKYEPGKRHWLKVKKD
YLYDGAMADSADLVVLGAWYGTGNKGGMMSVFLMGCYDEDRGNWVTVTKVHTGHDDATLA
MLQDELDMIKIGKDPAKVPLWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADG
ISIRFPRVTRIRSDKDWSSATTLNDLRRLFKQSSESIDLSLLLSSTSDHKEEGDDKTTRH
DSLPNAQEKQERKLKSPSKRNDDFKMIKKNCSPNKSLAKSKATSNRVRADTSKRTNEKVC
SSEGTNVSDQKDAKQAEFYAFVNNDYIEYSAMGIPLNWIEGRKPENGLPSDAKPLCNLTD
NELTSKSILKGAPVSLASGFTKSKEEDIRKLLKTLGAKVLNDQERSRAMYVIHSSKEIPS
SLVREFEDVSKTARHVSVSWVEAVVSTCEIQETEEHAVELIADYCSCPCLHR
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgtcgatgtcggacgaggagaaggaagaggagaagccgttcgcggtggaacgggcgaaa
agcggtcgcgccaagtgcaaaaaatgcaagtgccccatagaaaaggacaccgtaaggatc
gcgaagctagtcgcgaatccgttctccgatggcaaaatgaaagcctggtatcacttgagc
tgtctgttcgaggtgttcgccagacaacgggctaccaccaagagaatagacgatcccgaa
gaagatgtaagcggttggcaggatctgtgcgacgaggacaaaactgcgattcttcaaaga
atcgaggagtttgaaaactcgtctccgttcaagactccgaagatgacaccggccgcgaat
caatcctctggctcgaagaaacgtaaactcactcgtacgacggagtcggatccttctcct
aacaaaaaaccgaggaagaaagagaagaatggctccacgtccaccatcgacgacgcatcg
gatatctcaggatcggaaaagacgcccgagaaggtgcgaaaaccgacgagagacgacgcg
tttcaggaatttcaacgggtctgcgataacgtggccaaagtcgacgcctataccgacaag
acggcgattctaagaaagatgctaaccagagggtccgaaggtgatggtttcaacagcgac
gtaaagctgtggtgcagaatgctgcttccgggggcagtgaagaggatatacaacttgcag
agcaaacaattggtgaagctgttctctcgtatcctgcttgaggacgaggacgagatgttg
gagcatctcgagcaaggagacgtgagcgaaaccatccgggtgttttttgaaaagagcgta
gctttaaaaccagctgcaaaaagcgtacttacaattcaagaggtggacgagtttctgcaa
cagttgtcgtttctaactaaggaggacgaacagatttgtcactttcgttcgatcgtttcc
agatgcaccgcaggcgatctaaagatgatcatccggctgatcaagcacgatctaaggata
aacgctggcccgaaacatattttggccgcggtacacgatgacgcgtacaaagcctttcaa
acgtccagggacttggacagcgtgatcgaacgatgttggcgaggatcctcgaaattcgat
aaaccgtcttcgtcgccgggttcatcttccaacgtcaagatcacgctctcgctgatgaca
cctgtcttaccgatgttggcggaggcttgcaaatccgtggaaatggcgatgaagaaatgc
ccgaatggaatgctggccgaagtgaaatacgacggagaacgggtccaagtgcataagaag
ggaaacgaatttcggtatttcagcagatccttaaaaccggtgcttcctcataaagtgaac
ctcttcaagaattatattccgaaagcctttccagacggcgatgacttgattctagactcc
gagatccttatgatagatacgaaaactggacaaccattgccctttggtaccttaggcatt
cataagaaagctgaattcaaggatgccaatgcctgcttgtttatcttcgactgtatctat
tataacggggttgttttgttgcataaacccatgatggaacgaaggcgaattttaagagaa
agtatgacggagataccaaacaggataatgctgtcggaaatcaaggaagtctataaatct
caagacttggcagaaatgattgccagggttcttaaaatgggcctcgaaggattggtgctt
aaggacatccacagcaaatacgagccgggtaaaagacattggttgaaggtaaaaaaggat
tatttatacgacggtgcgatggccgatagcgcagatctcgttgtgctcggcgcatggtac
ggcacgggaaacaaaggtggtatgatgtcggtattcctgatgggctgctacgacgaagat
cgtggcaactgggtaacagtaacaaaagtacacaccggtcacgacgacgcaaccttagcc
atgcttcaggatgaactcgatatgataaaaataggtaaagatccggccaaagtaccactc
tggttgcgcgctaataaaccaatgattcctgactttgtcgcaaaggatccaaagaaacag
ccagtgtgggaaataacaggagcagaatttaccaatcaaggtgttcacacagctgacggt
attagtattagatttccacgggtaacgcgtattcgttctgataaagattggtcttccgct
actactttgaacgatttgcgacgtcttttcaagcagagttccgagtcgatagatcttagc
cttcttttgtcttcgacctctgaccataaggaagaaggtgacgataagacaaccagacat
gattccttgccaaatgcacaggagaaacaggaaagaaaattaaaatctccgtcgaaaaga
aatgacgattttaaaatgatcaagaaaaattgctctccgaacaagtcactcgcaaaatca
aaagctacctctaatcgtgtaagagccgacactagcaaaagaacgaacgaaaaagtatgc
agcagcgaaggaaccaatgtctcggatcaaaaggatgcgaaacaagcagaattttatgct
ttcgtaaataacgattacatagaatattctgccatgggaattccactaaattggatcgag
ggacgaaagccagaaaacggacttccgtcggatgcaaaaccattatgtaatctaacagat
aacgaattgacgtctaagagtattttaaagggcgcgccagtcagtttagcgtcaggtttt
acaaaaagcaaggaagaagacattcgcaagttactcaaaactctcggggccaaggtgttg
aacgatcaagagagatccagggccatgtacgtgattcattcttccaaggagattccatca
tcccttgtgcgcgagtttgaggacgtgtcgaagacggcaagacacgtgagtgtctcttgg
gtagaggcagttgtctcgacttgcgaaattcaagaaacggaagagcatgcggtagaactg
atcgccgattactgttcctgtccctgtttacatcggtga

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