Bradyrhizobium quebecense: J4P68_0016260
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Entry
J4P68_0016260 CDS
T07890
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bqb
Bradyrhizobium quebecense
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bqb03000
]
J4P68_0016260
Transcription factors [BR:
bqb03000
]
Prokaryotic type
Helix-turn-helix
Other families
J4P68_0016260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
HTH_50
HTH_28
Mg_chelatase
HTH_IclR
HTH_29
HTH_7
HTH_17
HTH_30
HTH_11
HTH_1
Phage-MuB_C
HTH_23
HTH_22
PAS_4
IclR
AAA_2
HTH_5
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UGY06188
LinkDB
All DBs
Position
3393864..3395729
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AA seq
621 aa
AA seq
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MANLSASNHVARVLSAANQVAGVDTEARIAASWRRCVVNHNLDPARRGPPQTLTEAEVRH
IAEPMEDLIQVAIPELEDLARVLHDSGYCVNLADPNATMLVSRLPGGDYARMFLEWKIYT
GSNFAETFEGTNGLGTALAEQRPIIVHGDEHFREQWHMFTCAVSPLFDHAGRLAGAVNIS
SCRSDLGRSAHELALAVTAEATRRIEQSFFRRRYRASWIATLPGDGHGMLAYDDDRRVVG
ACRTARGEFGLTDAMIDDGIDLSHLIQLDDRAARSADEPVTLRRADGTPWGRGRVAPPVR
ARVSRPLPAPSREAPAGQFSGLHRLAGRDPVLTKGVKRLMTVGNLDLPILLRGETGAGKD
VFARAIHAASNRAGRNYVALNCAAMPESLIDAELFGYEAGAFTGARREGSKGLIVQASGG
TLFLDEIGDMPLSLQTRLLRVLENREVWPLGALKPVAVDIRLISATHRDLARMAEDGSFR
SDLYYRLRGMEIRLPALRERADRRDIITQIADEEAPHCRISADAWAQLIAYPFPGNMRQL
RHVLRLAGATAEGGVITEADLDLPPVGTRNVGADHAAAERTAIVEALRTNDGRVTDAAKA
LGLSRATLYRKIKALGIELDS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctttcggcctcaaatcacgtcgcccgtgttttatcggcggccaatcaggtg
gccggcgtcgacaccgaggcgcggattgccgcgtcctggcggcgctgcgtggtcaatcac
aacctcgatccggcccggcgcggacctccgcagaccctgaccgaagccgaggtccggcac
atcgccgaaccgatggaggatttgatccaggtcgcgatcccggagctcgaggaccttgcc
cgcgtgctccacgatagcggctactgcgtcaacctcgccgatcccaacgccacgatgctg
gtgagccgcctgcccgggggcgactacgcgcggatgttcctggagtggaaaatctacacc
ggctcgaacttcgccgagaccttcgagggcaccaacgggctcggcaccgcgctcgccgag
cagcggccgatcatcgtgcatggcgacgagcatttccgcgagcagtggcacatgttcacc
tgcgcggtgtcgccgctgttcgaccatgccggccggctggccggcgccgtcaacatctcc
tcctgccgcagcgatctcggccgcagcgcgcatgaactggcgctcgccgtcaccgcggag
gcgacgcggcggatcgagcagtcgttcttccgccggcgctaccgcgcctcctggatcgcg
acgctgcccggcgacgggcatggcatgctcgcctatgacgacgaccgccgcgtcgtcggc
gcctgtcgcaccgcgcgcggcgagttcgggctgaccgatgcgatgatcgatgacggcatc
gacctgtcgcatctgattcaactggacgatcgcgcggcgcgttccgcggacgaaccggtc
acgctgcgccgggccgacggcacgccatggggtcgcggccgcgtggcgccgccggtgcgc
gcgcgtgtctcccgcccgctgccggcaccgtcgcgcgaggcgccggccggacagttttcc
ggcctgcaccggctggcggggcgcgatcccgtgctgaccaagggcgtgaagcggctgatg
acggtcggcaatctcgatctgccgatcctgctgcggggcgagaccggcgccggcaaggac
gtgttcgcgcgcgccattcacgcggccagcaatcgcgccggccgcaactatgtcgcgctg
aactgcgcggcgatgccggagagcctgatcgatgccgagctgttcggctacgaggccggc
gccttcaccggcgcgcggcgcgagggatcgaaggggctgatcgtgcaggcctctggcggc
acgctgttcctcgacgagatcggcgacatgccgctgtcgctgcaaacgcggctgctccgc
gtgctggaaaatcgcgaggtctggccgctcggcgcgctgaagccggtcgccgtcgacatt
cgcctgatcagtgcgacccatcgcgacctcgcgcggatggccgaggacggcagcttccgc
tccgatctgtattaccggctgcgcggcatggagatccggctgcccgccttgcgcgaacgc
gccgaccgcagggacatcatcacgcagatcgccgacgaggaagcgccgcactgccgcatc
tcggccgatgcctgggcacagctgatcgcctatccgttccccggcaacatgcgccaactc
cgccacgtgctgcggctcgcaggcgccaccgccgagggcggcgtcatcaccgaggccgat
ctcgacctgccgccggtcggcacgcgcaacgtgggggccgatcatgcggcggccgagcgt
accgcgatcgtcgaggcattgcgcaccaatgacggaagagtgacggacgctgccaaggcg
ctcggactcagccgcgcgacgttgtaccggaagatcaaggcgttagggatcgagctggac
agctag
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