Bradyrhizobium quebecense: J4P68_0032315
Help
Entry
J4P68_0032315 CDS
T07890
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4P68_0032315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqb03400
]
J4P68_0032315
Enzymes [BR:
bqb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J4P68_0032315
DNA repair and recombination proteins [BR:
bqb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4P68_0032315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
Motif
Other DBs
NCBI-ProteinID:
UGY01759
LinkDB
All DBs
Position
complement(6826330..6827793)
Genome browser
AA seq
487 aa
AA seq
DB search
MRIIVLDNDTDFEGWRKAARRLALNDVKPAEVTWTVRKDDELSSASCVNDLPDAPQARFN
VTAIFVELAKAAILHRNDERFALLYRLLWRLRSHHDLLSATDDPDVAEVHAMARAVYGDI
DRMHAQLRFREIGRERTAHYVAWFEPEHRIVEFAAPFFAGRFADMPWSILTPDVCAHWDG
HAISTSPGIAKSEVPNEDRLEEAWRRHDNGLFNPARLKVMEMPQAYWRNLPEDSIIKPLI
EDAMRMTSGPFIARKAAAPLKPQDEPMARKQARDKQVKDKQIQDKQAHDTIAALREEAAH
CRACPLWKDATQTVFGEGPQDASLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALEDAGIA
RAKVYITNAVKHFKFVPRGKIRLHQKPGTPEIRACRQWYARELDAIRPELVVALGATAAQ
SVLGKITPINKNRGRLIDHDGTKVLVTVHPSYLLRLPDEKARALEYQRFVDDLKIAADQL
RNPARAA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcatcgtgctcgacaacgacaccgatttcgagggctggcgcaaggccgcgcgg
cgattggcgctgaatgacgtgaagcctgcggaggtcacgtggaccgtacgcaaggacgac
gaactgtcgtcagcctcctgcgtgaatgacttgcccgatgcgccacaggcgcggttcaac
gtgacagccatattcgtcgagcttgcaaaggccgcgatcctgcatcgcaatgacgagcgc
ttcgccctgctctatcgcctgctgtggcggctgcgcagccatcacgatctgctcagcgca
actgatgatcctgacgtcgccgaggtccacgcgatggcgcgcgcggtctatggcgacatc
gacaggatgcacgcacagctccgcttccgcgagatcggccgcgagcggacggcgcattac
gtcgcctggttcgagccggagcatcgcatcgtcgagttcgctgcacctttcttcgccggc
cgcttcgccgacatgccgtggtcgatcctgactcccgacgtctgcgcgcattgggacggg
cacgcgatctcgacctcgccgggcatcgccaaatccgaggtgccgaacgaggatcggctc
gaggaggcctggcggcgtcatgacaacggcctcttcaatcccgcgcggctgaaagtgatg
gagatgccgcaggcctattggaggaacctgcccgaggactcgatcattaagccgctgatc
gaagacgccatgcgcatgaccagcggccccttcattgcacgcaaggcggccgcgccgctg
aagccgcaggatgagccgatggcccgcaagcaagcccgagacaaacaagtcaaagacaag
cagatccaagacaaacaagctcacgacacgatcgctgccttgcgcgaagaggccgcccat
tgccgcgcctgcccgctgtggaaggacgcaacccagaccgtgttcggcgaagggccgcaa
gacgcgtcgctgatgctggtcggcgagcagcccggcgacaaggaagatctcgcaggccat
ccctttgtcggaccggccgggcagatgctcgatcgcgcgcttgaggacgccggcatcgcg
cgcgccaaggtctacatcaccaacgcggtgaagcacttcaaattcgtgccgcgcggcaag
atccggctgcaccagaagccgggcacgccggagatccgcgcctgccgccagtggtacgca
cgcgagcttgacgccatcaggccggaactcgtggtggcgctcggcgctaccgcagcgcag
agcgtgctcggcaagatcaccccgatcaacaagaaccgcggccgcctgatcgatcacgac
ggaaccaaggtgctcgtcaccgtacacccgtcctacctgttgcggctgcccgacgagaaa
gccagagcgctggaatatcagcgctttgtcgacgatctgaaaattgccgcagatcagttg
cgcaatccggcccgcgcggcctga
DBGET
integrated database retrieval system
