Brevundimonas sp. MF30-B: E4M01_06675
Help
Entry
E4M01_06675 CDS
T06201
Name
(GenBank) DUF4130 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
brf
Brevundimonas sp. MF30-B
Pathway
brf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E4M01_06675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brf03400
]
E4M01_06675
Enzymes [BR:
brf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E4M01_06675
DNA repair and recombination proteins [BR:
brf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E4M01_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
PB1
Motif
Other DBs
NCBI-ProteinID:
QBX37480
LinkDB
All DBs
Position
1328157..1329599
Genome browser
AA seq
480 aa
AA seq
DB search
MATAWLDGETDFDSWRQAARRFRLEGVTPAEARFAVRGAAGQGSLFDTPTAPPVEAPQMG
ELRVPKDFVDLAREVILHRSQDRFDLLYRLLWRLGDEPDLMKVASDVDVCEALERAKNVS
RASHKMKAFVRFRRMEDEAGEAWVAWFEPAHRVVEKTAPFFQRRYTNLRWSILTPDGCAF
WDGEALTYGPPATRDMAPAEDEIEEFWKTYYASTFNPARLKMKTMQGEMAKRYWKNLPEA
ALIPELAALSAVRTEAMVSAPAAEPNARLAKATAPIHERGPADGLVASSLAELEKGVQGC
RRCPLWRDATQGVCGEGPRQAALMVVGEQPGDQEDLAGRPFVGPAGQVFNAALEEAGIDR
ADIYVTNAVKHFKHEPRGKRRLHKTPNAGEVTACRWWLDQERGLVKPRVVLALGATAGLG
VLGRKPAVTKERGEPIALEGGATALLTVHPSYLLRLPDAEAEARERALFVRDLTRAKALL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcctggctggacggcgagacggatttcgacagctggcgccaggccgcgcgc
cgctttcggctggagggcgtgacgccggccgaggcgcggttcgccgtgcggggcgcagca
gggcaggggagtctgttcgatacgccgaccgccccgcctgtcgaagcgccgcaaatgggg
gagctgcgcgtgcctaaggatttcgtcgatctcgcgcgcgaggtgatcctgcatcgctcg
caggatcggttcgacctgctctatcgcctgctgtggcgcctgggcgacgagccggatctg
atgaaggtcgcctccgacgtcgacgtttgcgaggcgctggagcgcgccaaaaacgtcagc
cgcgccagccacaagatgaaggccttcgtgcgctttcgccggatggaggacgaggccggc
gaggcctgggtcgcctggttcgaaccggcgcatcgcgtggtcgagaagaccgcgcccttc
tttcagcggcgctatacgaaccttcggtggtcgatcctgacgcccgacggctgcgccttt
tgggacggcgaggcgctgacctatggcccgcccgcgacgcgtgacatggcgccggccgag
gacgagatcgaggagttctggaagacctattatgcctccaccttcaatcccgcccggctg
aagatgaagacgatgcagggcgagatggccaagcgctattggaagaacctgcccgaggcc
gccctcatcccggaactggcggcgctgtcggcggttcggaccgaggccatggtgtccgcc
cccgctgccgaacccaacgcccgcctggcgaaggcgaccgcgccgatccacgagcgcggc
cccgccgacggcctggtcgcctcaagcctcgccgagctcgaaaagggcgtgcagggttgc
cgccgctgtccgctgtggcgcgacgcgacccagggcgtgtgcggcgaaggtccgcgccag
gcggcgcttatggtggtcggcgaacagccgggcgatcaggaggatctggccggccgaccc
ttcgtcggaccggcgggccaggtgttcaatgcggcgttggaggaggcgggcatcgaccgt
gccgacatctatgtcaccaacgccgtcaaacacttcaagcacgagccgcgcggcaagcgc
cggctgcacaagacgcccaacgcgggcgaggtcacggcctgccgctggtggctggatcag
gagcgcgggctggtgaagccgcgcgtggtcttggcgctgggcgccacggctgggctgggc
gtgctgggccgcaagccggcggtgacgaaggagcggggcgaaccgatcgcgctggagggc
ggcgcgacggcgcttctgacggtccacccctcgtatctgctgcggctgcctgacgccgag
gccgaagcgcgcgagcgcgccttgttcgtacgcgatctaacgcgggccaaagccctgctt
tga
DBGET
integrated database retrieval system
