Brevundimonas sp. MF30-B: E4M01_09360
Help
Entry
E4M01_09360 CDS
T06201
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brf
Brevundimonas sp. MF30-B
Pathway
brf03030
DNA replication
brf03430
Mismatch repair
brf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E4M01_09360 (dnaE)
03430 Mismatch repair
E4M01_09360 (dnaE)
03440 Homologous recombination
E4M01_09360 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brf03032
]
E4M01_09360 (dnaE)
03400 DNA repair and recombination proteins [BR:
brf03400
]
E4M01_09360 (dnaE)
Enzymes [BR:
brf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E4M01_09360 (dnaE)
DNA replication proteins [BR:
brf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E4M01_09360 (dnaE)
DNA repair and recombination proteins [BR:
brf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E4M01_09360 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QBX38948
LinkDB
All DBs
Position
complement(1843873..1847337)
Genome browser
AA seq
1154 aa
AA seq
DB search
MSTPEAERFVHLRVRSAYSLLEGAIKAGKIGRMAADAGMPAVAVADRANLFGALEFSQAT
RDAGVQPLVACALPVTGIGGRMVERWARTPTVVLIAQNEAGWLNLCALSSAAYLDAGEMA
EPGVDWRLIAERSEGLILLSGGPDGPIDPLFAQKKTRDGAEALAEMKRVFGDRFYVELQR
HGLPREAAAEGGLVGWAYETDTPLVATNDVYYAKAAQAKSHDALLCIADGAFTGQDDRRR
ITGEHWFKPASAMRELFADLPEACDNTVEIARRCAFLVQTRAPILPRFDTGAGRSEADEL
AHQAREGLKARLKQVEPAAPEEDYWARLDWEVGIIQQMGFPGYFLIVSDFIKWAKSHGIP
VGPGRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVIDY
VQDHYGSDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPANPVTLAQAI
ELEPRLKEARDSEAAVKALLETALELEGLYRNASTHAAGIVIGDRPLTELVPLYQDPRST
IPASQFNMKWVEPAGLVKFDFLGLKTLTVLDRARGYLERRGAAPDWNLLPLHDAPTYELM
ASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEVD
YLHPTLTEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQRARF
VKGASEKGVPEAQSGGIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANHPVEFFAASM
SLDLSNTDKLAVFYQDCRRFEVPVLAPDINRSSADFDVAYEDGQGAVLYALGAIRNVGLE
AMKHVVEVRQTGGPFADIFDFLERVDPRAVNKRALEGLAKAGAFDRLHPNRRQLFEQADV
LMAYCQSVAAERASSQVSLFGADQAHAARPRLRSVEPWAGPDQLDHELAAVGFYLSGHPL
EELTPALKRKRVTFVAEAQGLAEAGHEAFQMAGVVRRRQERASAKTGEKFAFVTFSDPTG
EFECLFPPEQLRRCREILEVGSAVLVKVRAKAADGEVRFFGDDARRMDTLLDDAEIGLRV
LLSAQAADAAALKARLDRARSQGKGGEVWLQTTLQSPEAGRQEVEIKLPGRYRLDAALRG
ALKSAPGVIMLEDA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atttccacgcccgaggcagagcggttcgtccatctgagggtgcgcagcgcctattcgctg
ctggaaggtgcgatcaaggcgggcaagatcgggcgcatggcggcggacgccggcatgccc
gcggttgcggtcgccgaccgggccaatctgttcggcgcgctggaattcagccaggccacg
cgagatgcgggcgttcagcctctggtggcctgcgccctgccggtcacgggaattggcggg
cggatggtcgagcgctgggcgcggacgccgaccgttgtgttgattgcacagaacgaggcc
ggctggctgaacctgtgcgccctctcgtcggcagcctatctggacgcgggcgagatggcc
gagcctggggttgattggcgactaatcgccgagcggtcggaaggcctgatcctgctgtcg
ggcgggcccgacgggccgatcgacccgctgtttgcccaaaagaagaccagggacggcgcc
gaggcgctggccgagatgaagcgggtcttcggcgatcgcttttatgtcgagctgcagcgt
cacggcctgccgcgcgaggcggcggcggagggcgggctggtcggctgggcctatgagacc
gacacgccgctggtcgccaccaacgacgtctattacgccaaggcggcgcaggcgaagtcg
cacgacgccctgctgtgcatcgccgacggggccttcaccggccaggatgaccgccgccgg
atcaccggcgagcactggttcaagccggcctcggccatgcgcgagctgttcgccgacctg
cccgaggcctgcgacaacaccgtcgagatcgcgcgccgctgcgccttcctggttcagacg
cgcgcgcccatcctgccgcgcttcgacacgggcgccgggcgctcggaagccgacgaactg
gcgcaccaggcgcgcgagggtctgaaggctcggctgaaacaggtcgagccggccgcgccc
gaggaagactactgggcccggctggactgggaagtcggcatcatccagcagatgggcttt
cccggctacttcctgatcgtgtcggacttcatcaaatgggcgaagtcgcacggcatcccg
gtcgggccggggcgggggtcgggcgcgggctcattggtggcctggtcgctgaccatcacc
gacttggatcccttgcggttcggcctgctgttcgagcgattcctgaaccccgagcgggtc
tccatgcccgacttcgacatcgacttctgccaggagcgacgcgaggaggtgatcgactac
gtccaggaccactacggttcggaccgcgtggcccagatcatcacgttcggcacgctgcag
gcgcgcgcggttctgcgcgatgtgggccgtgtgctgcagatgccgctcggtcaggtggac
cggctctgcaagatggtgccgaacaacccggccaatcccgtcaccctggcccaggccatc
gagctggagccgcgtctgaaggaagcgcgcgacagcgaggccgcagtcaaggcgctgctg
gaaacggcgctggagctggaggggctgtaccgcaacgcctcgacccacgcggcgggcatc
gtgatcggcgaccggccgctgaccgagttggtgccgctgtatcaggacccgcgctcgacc
atcccggccagccagttcaacatgaagtgggtggagcccgccggcctggtgaagttcgac
tttctgggtttgaagacgctgacggtgctggaccgggcgaggggctatctggagcggcgc
ggcgcggcgccggactggaacctgctgccgctgcacgatgcgccgacctatgagctgatg
gcttcgggccagacggtcggtgtgttccagctggaatcccagggcatgcgcgacaccctg
cgcaagatgcgctgcggctccatcgaggagatcaccgccctgatctcgctgtatcgacct
gggcctatggagatgatcgacacctatatcgaccgcaagttcggtcgggccgaggtcgac
tatctgcatcccaccctgaccgaggtgctgaccgagacctacggcgtcatcatctaccag
gagcaggtgatgaaaatcgcacagatcctggccggatacagcctgggcgaggccgacctg
ctgcgtcgcgccatgggcaagaagaagaaggaggagatggacttccagcgggcgcgcttc
gtcaagggcgcctccgagaagggtgtgccggaagcgcagtcgggcggcatcttcgacctg
gtggccaagttcgccggctacggcttcaacaagtcacacgccgcggcctatgccctgatc
agcttccagaccggctggctgaaggccaatcacccggtcgagttcttcgccgcctccatg
tcgctggacctgtcgaacaccgacaagcttgcggtcttctatcaggactgccgccgcttc
gaagtgccggtgctggcgcccgacatcaaccgctcttcggccgacttcgatgtggcttac
gaggacgggcagggagcggttctctacgcgctgggcgcaatccgcaacgtgggcctggag
gccatgaagcatgtggtggaggtgcgccaaacgggcgggccgttcgccgacatctttgac
ttcctggagcgtgtcgatccgcgcgcggtgaacaagcgcgcgctggaaggcctggccaag
gcaggcgccttcgatcggctgcatcccaaccgccgccagctgttcgaacaggccgatgtg
ctgatggcctattgccagagcgtggcggccgagcgcgcctccagccaggtcagtctgttc
ggcgccgaccaggcccacgccgcgcgcccgcgcctgaggagcgtcgagccttgggccggg
ccggatcagttggatcatgaactggccgcggtcggcttctatctgtcgggccacccgctg
gaggagctgaccccggcgctgaagcgcaagcgcgtgaccttcgtggccgaggcgcaaggc
ctggccgaggcggggcacgaggccttccagatggcgggcgtggtgcgtcgtcgccaggaa
cgcgccagcgccaagaccggtgagaagttcgctttcgtcaccttctcagacccgaccggc
gagttcgaatgcctgtttccgccagagcaactgcgccgctgccgggagattcttgaggtc
ggatcggccgtcctggtcaaggtgcgggccaaggcggccgatggcgaggtgcgcttcttc
ggcgacgacgcccggcggatggacacgctgctggacgacgccgagatcgggctgcgggtc
ctgctttcggctcaggcggctgacgctgcggcgctcaaggcgcggctggatcgcgcccga
tcgcagggcaagggcggcgaggtctggctgcagacgacgcttcagagccctgaggccggc
cgtcaggaggtggaaatcaaattgccgggccgctacagactggacgcggcgctgcgcggc
gcactcaagtcggcgccgggcgtcatcatgctggaggatgcctga
DBGET
integrated database retrieval system
