Mycetohabitans rhizoxinica: RBRH_03254
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Entry
RBRH_03254 CDS
T01355
Name
(GenBank) D-alanine--D-alanine ligase (EC 6.3.2.4)
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh00470
D-Amino acid metabolism
brh00550
Peptidoglycan biosynthesis
brh01100
Metabolic pathways
brh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBRH_03254
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBRH_03254
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RBRH_03254
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brh01011
]
RBRH_03254
Enzymes [BR:
brh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RBRH_03254
Peptidoglycan biosynthesis and degradation proteins [BR:
brh01011
]
Precursor biosynthesis
Amino acid ligase
RBRH_03254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
TTL
ATPgrasp_ST
RimK
ATP-grasp
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CBW73841
UniProt:
E5ALG8
LinkDB
All DBs
Position
302353..303300
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AA seq
315 aa
AA seq
DB search
MKMRAIDPKAFGKVAVLYGGESSERDVSLVSGRLACQGLRDAGVDAYLFDPKERPLSALK
DEGFARAFIALHGGYGENGQIQGALDFYGIRYTGPGVLGSALGMDKFRTKLIWQQLGIPT
PPFDTVLRGEDYDMRAQQIVAKLGLPLFVKPATEGSSVAVFKVKAADNLPHALAQAARHD
PVVLVEKSIDGGGEYTACIAGSLPLPLIRIVPAGEFYDYHAKYVADDTQYLIPCGLSDAD
EQRLTALARRAFEVLACTAWGRADFMLDSDGNPYFLEVNTSPGMTDHSLPPKAARAVGIS
YSELLVNVLALTLKD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgcgcgattgatccaaaggcattcggtaaagtggcggtgctctatggcggt
gagtcgtccgagcgcgacgtgtcgctcgtgtccggtcggctggcgtgccagggactgcgc
gacgccggcgtggacgcgtacttgttcgatccgaaggagcggcccttgtcggcgcttaag
gacgaagggttcgcgcgcgcgttcattgcgttgcacggcggatatggcgaaaacggccag
atccagggcgcactcgacttctacgggatccgctacaccggcccgggcgtgctcggctcg
gcactgggcatggacaagttccgcacaaaactgatttggcagcagctcgggatcccgacg
ccgccgttcgacacggtactgcgtggcgaggactacgacatgcgggcgcagcagatcgtg
gcgaaactcgggttgccgctgttcgtcaagccggcgaccgaaggctcaagcgtcgcggtg
ttcaaggtcaaggcggccgacaatttgccgcatgcactggcgcaggccgcgcggcatgat
ccggtcgtgctggtggagaagagcatcgacggtgggggagaatacaccgcgtgcatcgcc
ggctcgttgccgttgccgctgatccggatcgtgccggctggtgagttctacgattaccat
gcgaaatacgtcgctgacgatacccagtacctgattccgtgcggcttgagcgatgccgac
gagcagcgactaacggcgctcgcgcgccgcgcgttcgaggtcctcgcatgcaccgcctgg
ggacgtgctgacttcatgctcgacagcgatggcaacccctatttcctggaggtcaacacc
tcgcccggtatgaccgatcactcattgccaccgaaggcggcgcgtgcggtcggcatctcg
tatagcgaactgctcgtgaacgtgcttgcgctcacgctgaaggattga
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