Buceros rhinoceros silvestris (Rhinoceros hornbill): 104497698
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Entry
104497698 CDS
T08612
Symbol
COLEC12
Name
(RefSeq) collectin-12
KO
K10062
collectin sub-family member 12
Organism
brhi
Buceros rhinoceros silvestris (Rhinoceros hornbill)
Pathway
brhi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104497698 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brhi04131
]
104497698 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
brhi04091
]
104497698 (COLEC12)
Membrane trafficking [BR:
brhi04131
]
Endocytosis
Phagocytosis
Opsonins
104497698 (COLEC12)
Lectins [BR:
brhi04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Scavenger receptor with a CTLD (SRCL)
104497698 (COLEC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Lectin_C
Alpha-2-MRAP_C
Filament
DUF1363
DUF6779
Trimer_CC
HalX
Motif
Other DBs
NCBI-GeneID:
104497698
NCBI-ProteinID:
XP_010139280
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MVRWQNDVVLRTQPACTRAPCRRPPELLPPSPVTAAAVFTTAAPRGEQKTPLVILGATAA
SSERKRGDKTSNALFYVVLKFLKSCFAGIQEGTQCTKCKNNWALKFSIILLYILCALLII
TVAILGYKVVEKMDSVTGGMETSHRRYTEKLTEVESDLKKLDDQAGQKAMNTNTELSSFR
SDILALRQQLHDIAEKTTRNKDTLEKLQESGNVLDDRQIQMRSVLDTNSFMIISVNKTLQ
AYTGYINNLQQDTSNIQTNLQKQVHSHNVVIMNLNNLNLTQIQQRNLISVLQKSMEDTGL
AILRIKNDFQNLQQVVLQAQKDTDWLKEKVQNLQILATNNSALAKANNDTLEDMNNQLSS
FGGQMENLTTIAQANEQNLKDLQEQHKEYENRTSAKFSQLEERFQAFETDIVNIISNMSY
TAHHLRTLTSNLNEVRTACTDTLSKHSDELIFINTTLTNIRLDSASLKLQQDLMRSRLDV
EVANLSVIMEEMKLVDSKHGQLIKNFTVLQGPPGPRGPKGDRGPQGPLGPAGLKGQKGEK
GEPGPPGPAGEKGPPGPTGPPGEKGGKGSRGSPGSKGQRGSPGKTGLPGPSGDPGPPGPQ
GKDGPPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGLPGPKGPPGPPGPPXXGMPM
ALHSEPTSLPETNGCSPHWKNYTEKCYYFSIEREIFEEAKLFCEEKASRLVIINNKEEQQ
WIKRQILGKGSFWIGLTDSEKENEWRWLDGSLPVYTNWKIGQPDNWSHGHGPGEDCAGLI
YAGLWNDFYCEDVNNFICEKDMDK
NT seq
2413 nt
NT seq
+upstream
nt +downstream
nt
atggttcgatggcagaatgatgtagtgttaaggacccagcccgcctgcacgcgcgcgccg
tgccggagacccccggagctgctgccgccaagccctgtcaccgccgccgctgtgttcacc
acagctgcgccacggggggagcagaaaacccccctcgtcattttgggagccaccgccgct
tcttcggagaggaaaaggggagataaaaccagcaatgcgttattttatgttgttttaaaa
ttcttaaaatcttgttttgcaggtattcaagaggggactcaatgtaccaaatgtaaaaat
aactgggcactgaagttttccatcatcttgttatatattttatgtgcactgttaataatc
acggtagccattttgggatacaaagttgtagaaaaaatggacagtgtgacaggcggcatg
gaaacatcccacagaagatacacagaaaagctcacagaggtggagagcgatctgaagaaa
ttagatgaccaagctggacaaaaagccatgaatactaacactgaactgtctagcttcaga
tctgatattctggctcttcgtcagcagcttcatgacattgcagagaaaactaccagaaac
aaagatacactggagaagctgcaagagtctggaaatgtattagatgataggcagatccaa
atgagaagtgtcttagatactaactctttcatgatcatcagtgtcaataagactcttcag
gcatatactggctatatcaacaatcttcagcaagacacaagtaatatccaaacaaacttg
caaaaacaagtacattctcataatgtggtcatcatgaacctgaacaacttaaacctgaca
caaatacagcaaagaaatcttatcagtgttctgcagaagtcaatggaagatacaggcttg
gctattctaagaatcaagaatgactttcaaaatctgcagcaggttgtccttcaagcccaa
aaggacactgactggcttaaggagaaagtacaaaatttacagattttggccaccaacaac
tcagcattggcaaaagctaacaatgacacacttgaagacatgaacaatcagctcagctcc
tttggtgggcaaatggagaacctcacaacaattgcccaagccaacgaacaaaatctaaag
gatctccaggaacagcataaagaatatgaaaacagaacttctgccaaattcagccagcta
gaagagaggttccaggctttcgaaactgatatagtcaatatcattagcaacatgagctac
actgctcatcatctaaggacactgactagcaatctcaatgaggtcaggacagcttgtaca
gacaccttaagtaaacattcagatgagctgatttttataaacaccacactaaccaatatt
cgcttagactctgcatctctcaagctgcaacaggatttgatgaggtcaaggttagatgtt
gaagttgccaatttgtctgtaatcatggaagaaatgaagctggtagattccaaacatggc
cagctcatcaagaacttcactgtcctacaaggccctcctggcccaagaggaccaaaaggt
gacagaggccctcaaggtcctcttggccctgctggcctaaaaggacaaaaaggagagaaa
ggagagcctggaccaccaggtcctgcaggtgagaagggtccacctgggccaactgggcca
ccaggagaaaaaggagggaaaggttcaagaggatcgcctggctccaaaggtcagaggggt
tcccctggcaagacaggtctgcctggaccaagtggagacccagggccaccaggtccacaa
ggcaaagatggtccacctgggccacaaggcccaccaggatttcaaggcctgcaaggaact
gtgggagaaccaggggtaccaggacctcgaggactacctgggctacctggagtccctggg
ctgcctggtccaaagggcccacctggcccaccagggccaccnnnnnnnggaatgccaatg
gcattacacagtgaacctacatcactgcctgagactaatggttgttctcctcattggaag
aactatacagaaaagtgctactacttttcaattgaaagagagatttttgaagaggcaaag
ttattctgtgaagagaaggcatcacgcctggttatcataaacaacaaagaggagcagcaa
tggataaaaaggcagattttggggaaaggcagcttctggattggactaacggattcagag
aaagaaaatgaatggagatggctcgatggatccttaccagtttacacaaactggaaaatt
gggcaacctgataactggagccatgggcatggcccaggggaagattgtgctgggttgatc
tatgctgggctctggaatgacttctactgtgaagatgttaacaattttatttgtgaaaaa
gacatggacaaag
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