Brassica rapa (field mustard): 103827631
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Entry
103827631 CDS
T03449
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103827631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103827631
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103827631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
103827631
NCBI-ProteinID:
XP_009101401
UniProt:
M4E822
LinkDB
All DBs
Position
A06:27127431..27129709
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AA seq
420 aa
AA seq
DB search
MDMESGKLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPNVA
ERVVLLRHVIDGKLVEAKKAVPRDDQKSNSSLQGSSPGPANSKKIFVGGLASSVTEAEFK
KYFSQFGTITDVVVMYDHRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVP
KDPIRNQMNVNGFGSGRISALLMNEYSQGFSTSPVSSYGVKPEVRYSPGVVNRGGFSPFG
HGYGIDLNFEQDQTQSYGSGSSAGFGRPFSPGYTPSLSRYSSQIETGGANGSAAKNHLWG
NGGGLGYMSNSPISRSSFSGNSGMSSLGSIGDNWGGAGARARNSYRSEGGGLGLEAMRGV
HVGGLSSGSNSLEADSLYSDSAWLSLPAKADERLGMGAFDFMSRGPAGYINRQPNGGIAA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatatggagtcaggtaagctcttcatcggtggcatctcttgggagaccaccgaagac
cgtcttcgcgagtattttcagagcttcggcgaggttttggaggctgtcatcatgaaggat
cgtgccactggtcgtgcgcgtggctttggtttccttgtcttcgctgatcccaatgttgcc
gagagagtcgtcttgctcagacacgtcatcgatggtaaacttgttgaggcgaagaaggca
gttccaagagatgatcagaagagtaacagcagtctccagggatcatcacctggtccagct
aacagtaaaaagatctttgttggaggtttggcgtcatccgttacagaggctgagttcaag
aagtacttttctcagtttgggaccatcactgacgttgtggtgatgtatgaccaccgaaca
cagagaccgagaggctttgggttcatctcttatgaatcagaggacgctgtagacagagtt
ttgcggaggacgttccacgaactcaatgggaagatggtggaagtcaaactggctgttccc
aaggacccaatccggaaccaaatgaatgtcaatggctttgggagtggtagaatcagtgca
ttgctgatgaacgagtactcacaagggttcagcacgagtccagtctccagttatggagtg
aaacctgaagttaggtacagtccaggagtagttaataggggcggattctcaccttttgga
catggatatgggattgatctgaatttcgagcaagaccagactcagagctatggatctggc
tccagtgcaggctttggacggccctttagtccaggatatactccgagccttagcaggtac
agtagccagatcgagacaggaggagctaacggttcagcagcaaagaatcatttatgggga
aatggtggtggtctaggttacatgtcaaactcaccaatatctagaagcagcttcagtgga
aactctgggatgtcttcactaggcagcattggagacaactggggaggagcaggtgcacgt
gcacgtaatagctaccgcagtgagggaggaggcttaggattagaagcaatgagaggagtt
catgttggtggtttaagcagcggctcaaacagcttggaggcagactctttgtacagtgac
tcggcgtggctttcgctgcctgcaaaggcggatgaaagattgggaatgggagcatttgac
ttcatgtctagaggaccggctggatacatcaacaggcaaccaaacggaggaattgcagct
tag
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