Brassica rapa (field mustard): 103829159
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Entry
103829159 CDS
T03449
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103829159
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103829159
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103829159
03036 Chromosome and associated proteins [BR:
brp03036
]
103829159
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103829159
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103829159
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103829159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
Adaptin_N
SCD
CLASP_N
Cnd1
CEP104-like_TOG
Cobl
Motif
Other DBs
NCBI-GeneID:
103829159
NCBI-ProteinID:
XP_009103071
UniProt:
M4D7L4
LinkDB
All DBs
Position
A07:12154564..12158194
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AA seq
586 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAGELGVFIPFVGGVEHAHVLLPPLESLCTVEETCVREKAVDSLCKIGSEMRES
DLVDSFVPLVKRLAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSIYNQLCQDDMPMVR
RAAATNLGKFATTLESSYLNAEIMTMFDDLTKDEQDSVRLLAVEGCAALGKLLEPQDCVA
RVLPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLQDNEAEVRIAA
AGKVTKFCQLLNPELSIQHILPCVKDLSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDRLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWLQDKVYSIREAGANNLKRLAEEFGSEWAMQHLVPQV
LEMVNNPHYLHRMMALRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALQSINGAAVA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtggatgaacctttatatcccatcgctgtgctcattgacgagcttaagaac
gacgatatacagcttcgcttgaactccatccgtcgcctatctacaatcgctcgtgccctt
ggagaggagcgcacgaggaaagagttaatcccctttctgagtgagaacagtgatgatgac
gacgaggttctccttgcaatggctggggagctgggtgttttcattccttttgttggaggg
gttgagcatgcgcatgtgcttctccctcctcttgaatctctctgcaccgttgaagagacc
tgcgtgagagagaaagctgtggactcgctttgtaagatcggatctgagatgagggagagt
gatcttgtggactcctttgtccctcttgtgaagagacttgcagctggtgaatggtttgca
gctagagtttccgcatgtggtttgtttcatgttgcgtaccaaggctgtactgatgtgttg
aagacagagttgcggtctatttataaccagttgtgccaagatgatatgcctatggtgcgg
agagctgctgcaactaacctggggaaatttgctactactttggagtccagctatttgaac
gctgagatcatgactatgtttgatgatcttactaaagatgaacaagattctgttagacta
ttggctgtggaaggctgtgcagctcttggaaagttactggaacctcaggattgtgttgca
cgcgttttacctgttattgttaatttctctcaggataaatcttggagggtgcgctacatg
gttgctaatcagctatatgaactttgtgaggcagttggtcctgattgcaccaagacggat
ttggttccggcgtatgtgagactgctacaggacaatgaggctgaagtgcgaatagcagca
gcagggaaagtgactaagttctgccagcttttgaatccagagctttctattcaacacatc
cttccttgcgtgaaggatttatcatctgattcttctcaacatgtccgctctgctctagcg
tcagtaataatgggaatggctcctatccttggaaaggactcaaccattgagcatctccta
ccaatttttctctctcttttgaaagatgaatttcctgatgtacgcctcaacatcataagc
aagctagaccaagtcaaccaggttattgggattgatcggctgtcacaatccttgttgccg
gcgattgtagagcttgccgaggatcggcactggagagttcgtcttgctataattgagtac
gttcctctgttggccagccagttaggtatagggtttttcgatgacaagctcggagccctt
tgcatgcaatggttacaagacaaggtctactctatccgtgaagctggagcaaacaaccta
aagcgtcttgcagaggagtttggttctgaatgggcaatgcagcacctagttccccaggta
ttggagatggtcaacaatccgcactacctacacaggatgatggctctacgtgcaatatca
ctcatggctcctgtaatgggatcagaaatcacatgttctaagtttcttcccgtcgtggtt
gaggcatcaaaagacagagttccaaacatcaagttcaatgttgcaaaacttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggacaaaacaatacgtcagtgtttggtggac
ctgagcgaggaccctgatgttgatgttcgttattttgcaaaccaagcgcttcagtccatt
aatggtgccgcagtggcgtaa
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