Brassica rapa (field mustard): 103831125
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Entry
103831125 CDS
T03449
Name
(RefSeq) DNA ligase 6
Organism
brp
Brassica rapa (field mustard)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
103831125
NCBI-ProteinID:
XP_009105224
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All DBs
Position
A07:23353173..23360106
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AA seq
1371 aa
AA seq
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MASDSAGATIAGDFPNDDNAEALNLNSTELYSSAVPSSVPTPSLKPPFSPLSIPQSNRIP
KTNFTVDFFRSSSSSVAFFLSHFHSDHYSGLSSSWSRGIIFCSHITARLLKQILQVPSQL
VFPLPTNQKVIIDGSEVVLIDANHCPGAVQFLFKTNDGSERYIHTGDFRFCDSMRSDPFL
SSFVGCDVVFLDTTYCNPKFVFPTQQESVDYVISVIDKIDEESKQMKKKVLFLVATYVVG
KEKILIEISKRCNRKIFVEERKMSILNVLGCGEGGMFTEDKEESDVHVVGWNVLGETWPY
FRPNFVKMNEVMVERGYDKVVGFVPTGWTYEVKRNKFAVKVKDSMEIHLVPYSEHSNYDE
LREYIKLLRPKRVIPTVGVDVEKMDSREVYKMQKHFSGLVDEMANKKEFLLGFYRQSDKK
SEKDGVDVRENDAPGSDSLVTERLLIELRDSLPAWVSEEQMLDLIKKHAGNPVDIVSNFY
ECEAEFYKQSCIATSSLENQAVLIDDDGIDLQPIPAKGISSDCQESLKGFALPSKLGLTK
GIVSPGKRSKSIGNKSNKKAKKDPKSKPVGPGQSTITKFFDKVLDSGSSSVGVGSETEEC
NTDEKMVHNDAKETYKEVTDQFIDIVHGSESLREYAASIIDEAKGDINRALDIYYSKPSD
VPGEHAGEGGGLSSESNQLTQCPEACSSQENIKTSEKSGHTLNLSEQTSAKEMVDNDYVS
LPPEKYKPKEHACWRDGQPTPYIHLVRTFASVEGEKGKIKAMSMLCNMFRSVLALSPEDV
LPSVYLCTNKIAADHENIELNIGGSLISAALEEACGISRSTMREMYNRLGDLGDVAQLCR
QTQKLLVPPPPLLVRDVFSTLRKISVQSGTGSTRQKKNLIVKLMRSCREKEIKFLVRTLA
RNLRIGAMLRIVLPALGRAIVMNSFWNCHNKEPSENWFKEKLEGVSAAVVEAYNILPSLD
VVVPSLMEKDIEFSTSTLTMIPGIPIKPMLAKIANGVQDFIKLFQDKAFTCEYKYDGQRA
QIHLLLDGTVRIFSRNGDETTSKFPDLVDVIKQFACPAAETFMLDAEVVATDRKNGNQLM
SFQELSTRERGSKDALVITKSIKVEVCIFVFDIMFFNGEQLLTLPLRERRKCLKEVFPET
RPGFLEYAKEITVGTEEASMNNQDTLCRINAFLGEAFQSSCEGIMVKSLDVDAGYCPTKR
SDSWLKVKRDYVDGLGDTLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEFQSVCRVMS
GFSDAFYVEMKEFYSEDKILAKKPPYYRTGETPDMWFPAEVVWEIKGADLTVSPVHSAAL
GLVHPSRGISVRFPRFICKRADRDPEECSTAADIAEMFHAQTRKMNIKSQH
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgactccgccggagcaacaatcgccggcgacttcccaaacgacgataacgcg
gaagccctaaacctcaattctacagaactctactcatcagcagttccctcctccgttcct
acaccctccctgaaaccaccgttctctcctctctcaatccctcaatcaaaccgaatcccc
aaaacaaactttaccgtcgacttcttccgctcctcctcctcctccgtcgctttcttcctc
tcacacttccactccgaccactactccggcctctcctcttcctggtcccgaggaatcatc
ttctgctctcacataaccgcacgcctcctcaaacaaatcctccaagtcccgtcgcagctc
gtcttccctctacctacgaatcaaaaagttatcatcgatggctccgaagtcgttctcatc
gacgcgaatcactgcccaggagctgtacagttcctcttcaaaaccaacgatggctccgaa
aggtacattcacaccggagacttcagattctgcgattcgatgagatcagatcccttcctt
agtagcttcgttggctgcgacgtcgtttttctcgacactacttattgcaatccgaagttc
gttttccccacgcagcaagagtctgttgattatgtgattagcgtgatagataagatcgat
gaagagtctaagcaaatgaaaaaaaaggttttgtttcttgttgctacttacgttgttggt
aaagagaagattttaattgagattagtaagagatgcaataggaagatctttgtggaggag
aggaagatgtcgattttgaatgtattggggtgtggagagggtggaatgttcacagaggat
aaggaagagagcgatgttcatgttgtgggatggaatgtgttgggagagacttggccgtat
tttcgtccgaatttcgtgaagatgaatgaggttatggttgagagagggtatgataaggtt
gtaggttttgtgcccacggggtggacttatgaggtgaagaggaataagtttgcggtgaag
gttaaggattctatggagattcatcttgtgccgtatagcgagcattcgaattacgatgag
cttagggagtacataaagttgttgaggcctaaacgagttattcctacagttggtgttgat
gtggagaagatggatagcagggaggtttataaaatgcagaagcatttttctggactggtt
gatgagatggcgaacaagaaagagtttttattggggttctatcgtcagtctgacaagaag
agtgagaaagatggcgtagatgttagggaaaatgatgctccaggaagtgattctttggtg
actgaaagattgctgatagaactacgtgattctttgcctgcttgggtaagtgaagagcag
atgttagatctgattaagaaacatgctggtaaccctgtagatatagtaagtaacttctat
gaatgcgaagcagagttttacaagcaatcctgtattgccacgtcttccttggagaatcag
gctgttttgattgatgacgatggaatcgacttgcagccaattcctgctaagggcatttcg
tcagattgtcaagaaagtctaaaaggttttgccttaccaagcaaacttggtttaacaaag
ggtattgtttctccggggaaaagaagcaaaagcattggcaataagtcaaacaagaaggcc
aaaaaagatccaaagtcgaaaccagttggtccagggcagtcaaccataactaagtttttc
gataaggtgttggatagtggatctagttctgttggtgttggttcagagactgaagaatgc
aatacagatgaaaagatggtccacaatgatgctaaagaaacatacaaagaagtaacagat
caatttattgacattgttcacggttctgagtctttaagagagtatgctgcttccatcatt
gatgaggctaaaggagatataaatagggcactggacatctattacagtaaacccagtgat
gtacctggtgagcatgcaggtgagggaggaggactctctagcgaatcaaatcagttaacg
caatgtccagaagcgtgctcctcccaggagaacattaagacgtcagaaaaatcagggcat
acattgaacttaagtgagcagacatcagcaaaagaaatggtggacaatgattatgtatct
ctacctcctgaaaaatataagcctaaagagcatgcttgttggagggatggacagcctact
ccgtatatccaccttgtccggacatttgcttcggtcgaaggtgaaaagggcaagatcaaa
gctatgtctatgctttgcaacatgtttagaagcgtgttggctctctctccagaagatgtg
ctgccctctgtttatctttgcacaaataagattgccgctgaccatgagaatattgagctc
aacattggtggaagtctgatctctgctgcattggaagaagcatgtggaataagtcggtct
actatgagggagatgtataatagattgggagatcttggggacgttgctcagctgtgccga
caaacgcaaaagctactagttcctccacctccacttctagttagagatgtgttttcaact
ctacgaaagataagtgtgcagtcaggtactggaagtactaggcaaaagaaaaacctcatc
gtgaagctaatgcgctcttgtagagagaaagagatcaaatttctagttagaacattggcc
cgtaatttaaggattggcgctatgttgagaattgttctacctgcactagggcgagcaatt
gttatgaattctttctggaattgccataacaaagaaccatcagaaaattggttcaaagag
aaacttgagggtgtttctgctgcagtagttgaggcctacaatatacttccttctctggac
gtggttgttccttctctcatggaaaaagacattgagttttcaacatcaactctgacaatg
atcccagggataccaataaaacccatgcttgcaaaaattgctaacggggttcaagatttt
atcaagctcttccaagacaaggcttttacatgtgaatacaagtatgatggccagcgcgcc
cagatccatttgttacttgatggtacagtgcggattttctctcgaaatggggatgaaact
acttccaaatttcctgatctggttgatgttataaaacagtttgcttgccctgctgctgag
acgttcatgttggacgcagaggttgttgcaactgatagaaagaatggtaaccaactcatg
tcattccaagagttatcaacaagagagagagggagcaaagatgctttggtaattacaaaa
agtattaaggttgaagtctgcatctttgtgtttgatattatgttcttcaacggtgaacag
ctgttgactcttcccctccgtgagagacgaaaatgtctaaaggaggtcttccctgagact
aggccaggttttctcgaatatgctaaggaaatcactgtgggaacagaagaagcttctatg
aataaccaagacactttgtgtagaataaatgcgtttctaggagaagcatttcagtcatct
tgtgagggaatcatggttaagtctttagatgttgatgccggatactgccccacaaagcgt
tctgattcatggcttaaggtgaagcgagattatgttgatggattaggtgacacattggat
ttagttcctataggtgcttggcatggcaacgggagaaaagccggatggtatagtccattc
ctcatggcctgctacaaccctgagactgaggaattccagagtgtctgccgtgtcatgtct
gggttttctgatgccttttacgtcgagatgaaagaattctactccgaggataagatcctc
gcgaaaaagccgccatactacagaacaggggagacaccagacatgtggtttcccgcagag
gttgtctgggaaatcaaaggtgcggatctaaccgtctcacctgtacacagtgcggcttta
ggtctggtccatccatcacgaggcatctccgttaggtttccaagattcatctgtaaaagg
gcggatagggatccggaggaatgcagcacggcggcagatatagcagagatgtttcatgct
caaaccagaaaaatgaacatcaagtctcaacactaa
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