KEGG T03449: 103831896

Brassica rapa (field mustard): 103831896

Entry

103831896         CDS       T03449

Name

(RefSeq) glycine-rich RNA-binding protein 5, mitochondrial

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

brp Brassica rapa (field mustard)

Pathway

brp03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:brp00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103831896
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103831896
   03041 Spliceosome [BR:brp03041]
    103831896
Messenger RNA biogenesis [BR:brp03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103831896
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103831896
Spliceosome [BR:brp03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    103831896

SSDB

Motif

Pfam:

RRM_1 RRM_7 RRM_occluded

Other DBs

NCBI-GeneID:

103831896

NCBI-ProteinID:

XP_009106083

UniProt:

M4DHE9

LinkDB

Position

A07:26317463..26319730

AA seq 285 aa
MAFLSKVGKIFRQTSAHVTASNSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV
VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG
FGGPGGGNAGGYGAPSGGYGGGGGYGGGAGGYGAPAGGYGGGGYNAPGGGYGGGSSYGGN
AAGGGYGGNSPYGGNAGGGGGYGVAGGVGGSDNFAQGSSSNAGFDDKFSSSETLGNDTDH
QLESAGGEQFGGSDNQFGDSENGQTEIGGPDGFDQTDDGDVAKKA

NT seq 858 nt +upstreamnt +downstreamnt
atggctttcttaagtaaagttggaaagatatttaggcagaccagcgcccatgtcactgcc
tctaactcgatgctacagagcatccgttgcatgtcttcctctaaaatctttgttggaggt
atctcctacagcactgacgagtttggcttaagagaagcttttagcaaatatggagaagtc
gttgacgcgaaaatcattgtggaccgtgaaactggtaggtcaaggggctttgctttcgtc
acgtttacttctaccgaagaggctagcaatgccatgcaattggatggacaggaccttcat
ggtcgaagaattagggtgaactacgcaactgaaagaggaagtggatttggaggaagagga
ttcggtggtcctggtggtggcaatgccggtggttacggtgctccatctggtggttatgga
ggtggtggtggctacggaggaggtgctggtggttacggtgctccagctggtggttatgga
ggcggtggttacaatgctccaggtggtggttacggaggtggctcatcttacggtggaaat
gctgctggtggcggttatggaggtaactctccttatggtggcaatgccggtggtggtggt
ggatatggcgttgctgggggtgttggtggaagtgacaactttgctcaaggcagttcctct
aatgctggctttgatgacaagtttagcagcagcgaaacactaggcaatgacactgatcat
cagcttgaaagcgcaggaggtgagcagtttggtggaagtgacaatcagtttggtgactca
gagaacggtcaaacagagattggcggcccagacgggtttgatcagactgacgatggcgat
gttgccaagaaagcttag

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