Brassica rapa (field mustard): 103833004
Help
Entry
103833004 CDS
T03449
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103833004
03036 Chromosome and associated proteins [BR:
brp03036
]
103833004
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103833004
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103833004
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103833004
microRNA pathway
RISC loading complex
103833004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
103833004
NCBI-ProteinID:
XP_009107358
UniProt:
M4DCC3
LinkDB
All DBs
Position
A08:3261487..3267390
Genome browser
AA seq
1079 aa
AA seq
DB search
MVRKKRTDGSSEGGEGSGSREAGPHSGGGRGGYQQGGGRGGGGGQQQGGRGYGPQSQQGG
RGGGRGYGQPPQQYGGPRGGQQPQQYGGPREGQQPQQYGGPREGQPPQHQHQQQYGGPRG
GPPRGGYGGGGRGGAPSAGQPQRQSVPELHQATSPTYQAVSSQPTPSEVSPTRIPDTSAP
VQEFEQLSIEQGASSQAIQPIPSSSKAFKFPMRPGKGQVGKRCIVKANHFFAELPDKDLH
QYDVTITPEVTSRGVNRAVMKQLVDLYRESHLGRRLPAYDGRKSLYTAGPLPFVSKEFRI
LLHDEEEGAGGQRREREFKVVIKLAARADLHHLGMFLQGKQADAPQEALQVLDIVLRELP
TSKYTPVARSFYSPDIGRKQSLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEALPV
TEFVCQLLNRDIRSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTAVATRELT
FPVDERNTQKSVVEYFYETYGFRIQHTQLPCLQVGNSNRPNYLPMEVCKIVEGQRYSKRL
NERQITALLKVTCQRPQEREKDILRTVELNDYSHDPYAKEFGIKISASLASVEARILPPP
WLKYHESGREGTCLPQVGQWNMMNKKMINGGTVSNWICINFSRQVPDNMARSFCQELAQM
CHISGMAFNPEPVLPPVSARPEHVEKVLKTRYHDAMAKLSQGKEIDLLIVILPDNNGSLY
GDLKRICETELGIVSQCCLTKHVFKMSKQYMANVALKINVKVGGRNTVLVDALSRRIPLV
SDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKE
WKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACA
SLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRNSVDRSGNILPGTVVDSKICHPTEFDFYL
CSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA
FRARFYMEPETSDSGSMASGSMARGGGMGGRNMRGPHVNAAVRPLPPLKDNVKRVMFYC
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactgatggttcatctgaaggaggtgaagggtctggctcccgt
gaagctggtccacactctggtggtgggcgtggtggttatcagcaggggggaggaagagga
ggaggaggaggacagcagcaaggtggaagaggttatggtcctcagtctcaacagggaggt
cgtggtggtggtcgaggttatggccagccaccacagcagtacggtggacctagaggtggc
caacagccacaacagtacggtggaccaagagaaggccaacagccacagcagtacggtgga
ccaagagaaggccagccaccacagcaccaacaccaacaacagtacggtggaccgagagga
ggacctcctcgaggtgggtacggcggtggtggccgtggaggtgcgccctctgctggacag
ccacagagacaatcagttcccgagctgcatcaagctacctcaccaacttatcaagcggtg
tcttctcagcctacaccgtctgaggtgagtcctacacggattccggatacttctgctccg
gttcaagaatttgaacagctctctattgaacaaggagcttcgagtcaggcaatccagcct
attccatcttccagcaaagcttttaagttcccaatgaggcctgggaaaggacaggtcggc
aagcgttgcattgtaaaggccaaccacttctttgctgagttgcctgacaaagatttgcac
cagtacgatgttactattactccagaagtcacatcaaggggtgttaatcgtgctgtgatg
aaacaattggttgacttgtatcgcgagtcacaccttggaagacgtcttcctgcatatgat
ggtcgcaaaagtctctacactgctggaccgcttccatttgtttccaaggaattcagaatc
ttgcttcatgacgaggaagaaggggctgggggacaaagacgagaaagggagttcaaagtt
gtgataaagctagctgcacgtgctgatctgcatcacctaggaatgtttctacaagggaaa
caagctgatgccccgcaggaggctctgcaggttcttgatattgttcttcgtgagctgcca
acttccaagtatactcctgtggcccggtcattttattctcctgatatagggagaaagcaa
tcattgggggatggcttggagagctggcgtggattctaccaaagcattcgtcccacacag
atgggtttatcactcaacatagacatgtcatcgacagcattcatagaggcacttcctgtg
actgaatttgtttgccagttgctgaatagggatattagatcccggcctttatctgatgct
gatcgtgtgaagatcaaaaaggctcttagaggtgttaaggttgaagtgacccatcgagga
aatatgcgccggaagtaccgcatttctggcctgactgctgtggccactcgagaactgaca
tttcctgtcgatgaaagaaacacccagaagtctgttgttgaatacttctacgaaacatat
ggctttcggattcagcacacacagcttccatgcttgcaagttgggaattctaacaggcca
aattatctaccaatggaggtctgcaagatagttgagggtcagagatactcaaaaaggttg
aacgagaggcaaatcactgctctgctgaaggtgacttgtcagcgcccccaagaacgagaa
aaagatatcttacgaacggtggagctaaatgattacagtcacgacccctatgctaaggag
tttggcatcaagataagtgcgtctcttgcttctgttgaagctcgaattctgcctcctcca
tggctcaagtatcatgaatctggaagggaggggacttgtctgccacaagttggtcagtgg
aatatgatgaataagaaaatgatcaatggcggaacagtgagcaactggatctgcattaac
ttctctaggcaagtgccagacaatatggcacgttctttctgtcaggaacttgctcagatg
tgccacatatctggcatggcctttaatccagaaccagtcctcccaccagttagtgctcgt
cctgagcatgtggagaaagtcctgaaaactcgatatcatgatgccatggccaagctatct
caaggaaaagagattgatctccttattgtcattctaccagacaataatggatcattatat
ggtgatctgaagcgcatctgtgagaccgaactcggcattgtgtctcagtgctgcctgact
aagcatgtcttcaagatgagcaagcagtatatggctaatgtggctttgaaaattaatgtt
aaagttggaggaaggaatacagtgcttgttgatgccttgtcaaggcgaattcctctggtc
agtgatcgccctaccataatctttggtgctgatgtaacccatcctcatcctggagaggat
tcaagcccgtctattgctgctgttgtcgcatcccaggactggcctgaagttaccaagtat
gctggactggtgtgtgctcaggcgcatagacaagagctcattcaggatctgttcaaagaa
tggaaggatcctcagaaaggggtggtgactggtggcatgataaaggagttacttatagcc
ttccgtagatcaactgggcataagccgttgaggatcatattctatagggacggagttagt
gaaggacaattctatcaggttttgctctacgagcttgatgccatccgcaaggcatgtgcc
tcgctggaagcaggttatcagccaccagtgacgtttgtggtggtgcagaagcgccatcac
acgaggctctttgctcagaaccataatgatcgtaattcagtggatagaagtggcaacatc
ttaccaggaactgtcgtggattccaaaatatgtcaccctacggagttcgacttttacctc
tgtagccatgctggtattcagggaacttctcgacctgcccattaccacgttctttgggat
gagaacaacttctctgctgatggactccagtctctaaccaataacttatgttacacgtat
gcgagatgcactcgttctgtatccattgtgccgcctgcgtactatgctcatctagcagcg
ttcagggctcggttctacatggagccagagacatcagacagtggttcgatggcaagcggg
agcatggcacgtggaggtggtatgggtggtagaaacatgcgtgggcctcacgtgaacgct
gctgtgaggccactcccacctttgaaagataacgtgaagcgagttatgttctactgctga
DBGET
integrated database retrieval system
