Brassica rapa (field mustard): 103834168
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Entry
103834168 CDS
T03449
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103834168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103834168
03041 Spliceosome [BR:
brp03041
]
103834168
03032 DNA replication proteins [BR:
brp03032
]
103834168
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103834168
Spliceosome [BR:
brp03041
]
Complex A
U1 snRNP components
Sm proteins
103834168
U2 snRNP components
103834168
Complex B
U1 snRNP components
103834168
U4/U6.U5 tri-snRNP components
103834168
Complex C
U2 snRNP components
103834168
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103834168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103834168
NCBI-ProteinID:
XP_033132463
LinkDB
All DBs
Position
A08:complement(11807148..11808672)
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AA seq
251 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPGKGKKIN
EEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAALAGPGLGRAAGRGVPTGP
LVQAQPGLSGPVRGVGGPSPGMMQPQISRPPVMRPPGQMLPPPPAFGGQGPPMGRGPPPP
AYGGMRPQFGGPPPPYGQRPMGPPPGGMMMRGPPPPPHGMQGPPPPRPPPGGFAPRPGMQ
GPPPPQHNQQQ
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgctccagttcataaactacaggatgcgagtcacc
atccaagacggacggcagctcgtcgggaaattcatggccttcgaccgccacatgaacctc
gtcctcggcgactgcgaggagttccgcaagcttccgccaggcaaaggcaagaagatcaac
gaagagagagaagagcgccgcacgctcggcttggtcttgctcagaggcgaagaagtcatc
tccatgacggtagaaggaccgcctcctcccgaagagtctcgcgctaaggccggatcagca
gcggctcttgctgggcctggattgggccgtgctgctggacgtggagtgcctacagggccg
cttgtccaagctcagcctgggctttctgggcctgttcgtggagttggtgggccttcgccg
gggatgatgcagcctcagatctctaggcctccggttatgagacctcctgggcagatgctt
ccgccgcctcctgcttttggtggtcaaggtccgccgatggggagaggtcctcctcctccg
gcttatggtggtatgaggccgcagtttggtggaccgccgcctccgtacgggcagaggcct
atgggtcctcctcctggtgggatgatgatgagaggtcctcctccacctcctcatgggatg
caaggtccgcctccgcctaggcctcctcctggtggttttgctccgcgtcccggcatgcaa
gggcctccgcctcctcagcataatcagcagcagtga
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integrated database retrieval system
