Brassica rapa (field mustard): 103834862
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Entry
103834862 CDS
T03449
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a isoform X1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103834862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103834862
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
103834862
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GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
103834862
NCBI-ProteinID:
XP_009109199
UniProt:
A0A3P6CCN4
M4D1V5
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Position
A08:complement(15368009..15370164)
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AA seq
321 aa
AA seq
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MRPPLTGGRGGGGFSGGRGGGGYSGGRGGSSGGRGRGGGRGFGDRGGRGGGRGMSRGGRG
DRGRGRGGPGGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTRNLVPGEAVYNEKRISV
PNEDGTKTEYRVWNPFRSKLAAAILGGVDNIYIKPGAKVLYLGAASGTTVSHVSDLVGPE
GCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFADVAQPDQAR
IVALNASFFLKTGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPAEQVTLEPFER
DHACVVGTYRAPKKAKAATAA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctctaactggtggacgtggtggtggtgggttcagtggtggacgtggtggc
ggtggatacagtggtggacgaggaggtagctctggaggtagaggaagaggaggaggaaga
ggtttcggagaccgtggtggacgtggcggcggtagaggcatgagcagaggaggtagagga
gaccgtgggcgtggcagaggaggacccgggggacgtggagggatgaagggaggcagcaaa
gtgattgtggagccacacagacacgcgggagtgttcattgccaagggtaaagaagatgct
ctcgtcactaggaacttggttcctggtgaagctgtttacaacgagaagagaatctctgtt
ccgaatgaagatggaactaagactgagtacagagtgtggaaccctttccgttctaagctg
gcggctgctattctcggtggtgttgataacatttacattaaacctggtgctaaagttctg
taccttggtgctgcttctggaaccacagtctctcatgtgtctgaccttgttggacccgag
ggatgtgtttacgctgttgagttttctcacagaagtggtagagatttggtgaacatggcg
aagaagaggactaatgttatcccaatcattgaagatgctagacaccctgccaaatacaga
atgcttgttggcatggttgatgttatcttcgctgatgttgctcagcctgatcaggctagg
atcgtggctttgaatgcaagcttcttcctgaaaacaggaggtcactttgttatttcaatc
aaggcaaactgtattgactcaacagttccagcagaagccgtgtttcagagcgaagtgaag
aagctgcaacaagagcagttcaagccagcagagcaagtgactcttgagccatttgagcgt
gaccatgcttgtgtcgttggtacctaccgtgcccctaagaaggccaaggctgctactgcc
gcttag
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