Brassica rapa (field mustard): 103835419
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Entry
103835419 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103835419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103835419
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103835419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
103835419
NCBI-ProteinID:
XP_009109834
UniProt:
M4D3A5
LinkDB
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Position
A08:18157144..18159540
Genome browser
AA seq
399 aa
AA seq
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MFGTPSSSPAFGTPSSTPMFGSSSTSAFGTPSSTPAFGTPSSTPAFGTPSATPAFGTPSS
TPAFGTPSTSSFASGGFGNSLFSTPFSSQQPQQQQQQQQQNSPFQQPASSGFGFQSPFNT
AQQQTPFQTTQLTTQMAPVAPIPFSLADRDIQAIVEAYKEDPTNPKYAFKHLLFSVTEQQ
YRVKPAAVSDIMWAEAMSKLEGMDSSERERLWPQLVQGFKDLSQRLKLQDEVLVSDRERI
KTTQSNVKMLQRHLQAHTFPSIERLRQKEQNLQRRMLRVMRIVEGLEGKGFRLPLTKGEA
ELSEKLTGITRQVKGPGAELSRRVQSLQTICRAQANSFSAGSSIYLPGSTKIDEQSLIDM
QEVLQQETEAIGRLGNVLKRDMRDMEIMVAEDTEMTEDT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactccgtcttcctcgccggcgttcggcactccctcgtccacgccgatgttc
ggttcctcctcaacctccgccttcggcactccttcttccaccccggccttcggtacgccg
tcatccactcccgccttcggaacgccctcagcaacgcctgccttcggcacgccttcatcc
acgccggcgttcggaacgccgtcgacatcttccttcgcctctggaggatttggaaactcg
ctcttctccactccgttctcatctcagcagccacagcaacaacagcagcagcagcagcag
aactcgccgtttcagcaaccggcgtcttctggtttcggttttcagtcgccgttcaacacg
gcgcagcagcagacgcctttccaaactacgcaattgactactcagatggctcccgttgct
ccgattcctttctccctcgccgatcgtgatattcaggccatcgttgaagcgtataaggaa
gatccgacgaatcctaagtatgcgtttaagcatcttttgttcagtgtgactgagcaacag
taccgtgtgaagcctgcagctgtatcagatataatgtgggcagaggccatgagcaaactt
gaaggcatggattcatcagaaagagagcgcctttggcctcagcttgtgcaaggctttaaa
gatctttctcagcgacttaagcttcaagatgaagttctcgtatcagatagggaaagaata
aaaacgactcagagcaacgttaaaatgcttcagagacatttgcaagcacacacctttcca
tctattgaaaggttgagacagaaggagcagaatcttcaaagacgcatgttgagggtgatg
aggatagtagagggcttagaggggaagggtttccggttacccttaacaaaaggagaggcc
gaattgtctgagaagctaactggaataacaagacaggtgaaaggtcctggagcagagctt
tctaggagagtccaaagtctgcagacaatatgtcgcgcccaagcaaattcattttctgct
ggtagctccatttatctcccggggtcaactaaaatagacgagcagagcctgattgatatg
caggaggtattgcaacaggagacggaggcaataggaaggcttgggaacgtattgaagcga
gacatgagggatatggaaatcatggtggctgaagatacagagatgaccgaggacacatag
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